Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   IGS65_RS03585 Genome accession   NZ_CP066294
Coordinates   716426..718228 (-) Length   600 a.a.
NCBI ID   WP_002266459.1    Uniprot ID   -
Organism   Streptococcus mutans strain 27-3     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 711426..723228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS03560 (IGS65_003560) - 711821..712507 (-) 687 WP_002263646.1 response regulator transcription factor -
  IGS65_RS03565 (IGS65_003565) - 712508..713131 (-) 624 WP_002268771.1 GTP pyrophosphokinase -
  IGS65_RS03570 (IGS65_003570) - 713369..713863 (-) 495 WP_192072197.1 hypothetical protein -
  IGS65_RS03575 (IGS65_003575) tpx 714000..714485 (-) 486 WP_192072196.1 thiol peroxidase -
  IGS65_RS03580 (IGS65_003580) rcrQ 714682..716436 (-) 1755 WP_002263294.1 ABC transporter ATP-binding protein Regulator
  IGS65_RS03585 (IGS65_003585) rcrP 716426..718228 (-) 1803 WP_002266459.1 ABC transporter ATP-binding protein Regulator
  IGS65_RS03590 (IGS65_003590) rcrR 718232..718666 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  IGS65_RS03595 (IGS65_003595) queC 719108..719761 (+) 654 WP_192072195.1 7-cyano-7-deazaguanine synthase QueC -
  IGS65_RS03600 (IGS65_003600) queD 719761..720207 (+) 447 WP_002265145.1 6-carboxytetrahydropterin synthase QueD -
  IGS65_RS03605 (IGS65_003605) queE 720204..720920 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  IGS65_RS03610 (IGS65_003610) queF 720933..721421 (+) 489 WP_002263288.1 preQ(1) synthase -
  IGS65_RS03615 (IGS65_003615) - 721531..721914 (+) 384 WP_002270896.1 DUF3021 family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66940.75 Da        Isoelectric Point: 9.6552

>NTDB_id=519119 IGS65_RS03585 WP_002266459.1 716426..718228(-) (rcrP) [Streptococcus mutans strain 27-3]
MFKIFKRLNAKEWGMVLLSTAFICLAVWMDLKTPEYMSNITTLLQTKGTTASDIMDPGSKMLMFSFGSFFMAVLVGFLAS
RTAASFTTRLRSDIFNRVMDYSEAEIKKFSIPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAVWALTKIWGKSDEWTGA
VGVAVLIVFIMLSVLMFVAFPRQRQVQSLTDALNSTTRESLTGVRVVRAYNAEDYQDTKFKRENKNLTKLNLLVYRLMSL
MNPVMTVVSSGLTLAIYWIGAYLLNDIKIPMTSVTAAKGAIADRISVFSDMVVFSSYAMQVVVGFMMMVAIFIILPRALV
SAKRINEVLALNSSVHFKEYSKADNARKGEVEFHDVSFRYSKNSRAVIEHVSFSAKAGETVAFIGSTGSGKSTLVNLIPR
FYDATEGWIKIDGIKVQDYSHDDLNNKVGYIPQKAVLFSGTIRSNIAFGQSDQAPLDDAKIWEALELAQAKNFVEEKEKG
LDTEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILRNDLAKKTKEMTKLIVAQRISTIMDADHIL
VLDQGKVVGQGTHKELLANNDIYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=519119 IGS65_RS03585 WP_002266459.1 716426..718228(-) (rcrP) [Streptococcus mutans strain 27-3]
ATGTTTAAAATTTTTAAACGTCTAAATGCTAAAGAATGGGGCATGGTTCTCCTTAGTACTGCCTTTATCTGTTTGGCTGT
CTGGATGGATTTGAAGACGCCCGAATATATGTCCAACATTACAACCTTGCTGCAGACTAAGGGAACGACCGCCTCAGATA
TTATGGATCCGGGATCTAAGATGCTCATGTTTTCATTTGGGAGCTTTTTTATGGCCGTTCTAGTTGGTTTTTTAGCTTCA
AGAACAGCTGCTAGCTTTACGACCCGTCTTCGATCTGATATTTTCAATCGGGTTATGGATTATTCAGAGGCGGAAATCAA
GAAATTTTCCATTCCCAGCCTTCTAACGCGTACGACTAATGATTTGACACAGTTGCAAATCATGATCGTTATGGGAATGC
AAGTGGTGACACGCGGTCCAATCATGGCTGTTTGGGCCTTGACTAAAATCTGGGGTAAAAGCGATGAATGGACAGGAGCA
GTCGGTGTTGCCGTTTTAATTGTCTTTATTATGCTGTCTGTTTTGATGTTTGTCGCTTTTCCAAGACAGCGTCAGGTGCA
GAGCTTGACGGATGCTCTAAATTCTACAACCCGTGAATCTCTGACTGGTGTTCGTGTTGTTCGGGCTTACAATGCAGAAG
ATTATCAGGACACTAAATTTAAGCGGGAAAATAAAAACCTGACGAAATTGAATTTATTGGTCTATCGTCTGATGTCGCTA
ATGAATCCTGTCATGACAGTTGTTTCCAGTGGTCTAACTTTAGCTATTTATTGGATTGGAGCTTACCTGCTCAATGATAT
TAAAATTCCTATGACGAGTGTGACAGCTGCTAAAGGAGCTATTGCTGATCGTATCAGTGTTTTTAGTGATATGGTTGTCT
TTTCATCTTATGCCATGCAGGTTGTTGTCGGTTTTATGATGATGGTCGCTATCTTTATCATTTTACCGCGTGCTTTAGTT
TCTGCCAAACGAATTAATGAAGTATTGGCGCTTAACTCATCTGTACACTTCAAAGAATATTCTAAAGCAGACAATGCTCG
AAAAGGAGAAGTCGAATTTCATGATGTATCGTTTCGTTACAGTAAAAATTCTCGTGCGGTTATTGAGCATGTGTCTTTCA
GTGCTAAAGCTGGTGAGACAGTTGCTTTTATTGGTTCCACTGGCTCAGGAAAATCAACTCTTGTTAATCTGATTCCTCGT
TTTTATGATGCTACAGAAGGTTGGATTAAGATAGATGGAATCAAAGTGCAAGATTACAGCCATGATGACCTCAACAATAA
AGTCGGCTATATTCCGCAAAAGGCAGTGCTTTTTAGTGGGACCATTCGTTCTAATATTGCATTTGGGCAAAGCGATCAAG
CGCCGCTTGATGATGCTAAAATTTGGGAGGCTCTTGAACTAGCCCAAGCCAAAAACTTTGTTGAAGAAAAAGAAAAGGGT
CTGGATACCGAGGTAGCTCAAGGCGGTACCAACTTCTCTGGCGGTCAAAAGCAGCGCTTAGCTATTGCCCGTGCACTTGC
ACGCAAACCAGAAATTCTTATTTTTGATGACTCCTTCTCAGCTCTTGATTATAAGACGGATCGCATTCTGCGAAATGATT
TGGCAAAGAAAACCAAAGAAATGACTAAGTTGATTGTAGCCCAACGTATTTCAACTATTATGGATGCTGATCATATTTTA
GTCTTAGATCAAGGAAAGGTTGTTGGTCAAGGAACACACAAGGAATTACTGGCTAATAACGATATTTATCAAGAAATTGC
TTATTCACAACTATCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(369-518)

ABC transporter transmembrane region (ABC_membrane)

(17-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

99.833

100

0.998