Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IGS65_RS01130 Genome accession   NZ_CP066294
Coordinates   204186..204989 (+) Length   267 a.a.
NCBI ID   WP_002262928.1    Uniprot ID   A0AAX1K323
Organism   Streptococcus mutans strain 27-3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 199186..209989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS01105 (IGS65_001105) - 199471..200175 (-) 705 WP_002262933.1 amino acid ABC transporter permease -
  IGS65_RS01110 (IGS65_001110) - 200193..201005 (-) 813 WP_002262932.1 transporter substrate-binding domain-containing protein -
  IGS65_RS01115 (IGS65_001115) - 201002..201784 (-) 783 WP_192072331.1 amino acid ABC transporter ATP-binding protein -
  IGS65_RS01120 (IGS65_001120) vicR 202137..202844 (+) 708 WP_002262930.1 response regulator YycF Regulator
  IGS65_RS01125 (IGS65_001125) vicK 202837..204189 (+) 1353 WP_002264821.1 cell wall metabolism sensor histidine kinase VicK Regulator
  IGS65_RS01130 (IGS65_001130) vicX 204186..204989 (+) 804 WP_002262928.1 MBL fold metallo-hydrolase Regulator
  IGS65_RS01135 (IGS65_001135) rnc 205096..205791 (+) 696 WP_002266141.1 ribonuclease III -
  IGS65_RS01140 (IGS65_001140) smc 205791..209327 (+) 3537 WP_192072330.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29693.77 Da        Isoelectric Point: 6.1184

>NTDB_id=519109 IGS65_RS01130 WP_002262928.1 204186..204989(+) (vicX) [Streptococcus mutans strain 27-3]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAATWQAMDGMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGIYPWSLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=519109 IGS65_RS01130 WP_002262928.1 204186..204989(+) (vicX) [Streptococcus mutans strain 27-3]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGACGCAGGCCTCTCAGGTAAGAAAATTAGTCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGCAACATGGCAAGCTATGGATGGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TTTGGGGAAAACCATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTTAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGTTTTGTCATATTGACGGATACAGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTATCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGGTTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

100

100

1