Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I9H06_RS22790 Genome accession   NZ_CP066267
Coordinates   5025826..5026236 (-) Length   136 a.a.
NCBI ID   WP_005888348.1    Uniprot ID   -
Organism   Pseudomonas tremae strain PA-1-12B     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5020826..5031236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I9H06_RS22775 (I9H06_22665) - 5022628..5024670 (-) 2043 WP_005888352.1 methyl-accepting chemotaxis protein -
  I9H06_RS22780 (I9H06_22670) - 5024860..5025399 (-) 540 WP_005888350.1 chemotaxis protein CheW -
  I9H06_RS22785 (I9H06_22675) pilH 5025414..5025779 (-) 366 WP_005888349.1 twitching motility response regulator PilH -
  I9H06_RS22790 (I9H06_22680) pilG 5025826..5026236 (-) 411 WP_005888348.1 twitching motility response regulator PilG Regulator
  I9H06_RS22795 (I9H06_22685) gshB 5026482..5027441 (+) 960 WP_024668621.1 glutathione synthase -
  I9H06_RS22800 (I9H06_22690) - 5027597..5028499 (+) 903 WP_024668620.1 energy transducer TonB -
  I9H06_RS22805 (I9H06_22695) - 5028576..5029148 (+) 573 WP_005888343.1 YqgE/AlgH family protein -
  I9H06_RS22810 (I9H06_22700) ruvX 5029148..5029588 (+) 441 WP_005888341.1 Holliday junction resolvase RuvX -
  I9H06_RS22815 (I9H06_22705) pyrR 5029687..5030199 (+) 513 WP_122346981.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  I9H06_RS22820 (I9H06_22710) - 5030212..5031216 (+) 1005 WP_122346982.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14979.45 Da        Isoelectric Point: 8.5340

>NTDB_id=519039 I9H06_RS22790 WP_005888348.1 5025826..5026236(-) (pilG) [Pseudomonas tremae strain PA-1-12B]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIKAHVPGFVAAEHHLS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=519039 I9H06_RS22790 WP_005888348.1 5025826..5026236(-) (pilG) [Pseudomonas tremae strain PA-1-12B]
ATGGAACAACACGCCTCCGCCTTGAAAGTCATGGTCATCGATGACTCGAAGACTATCCGCCGCACCGCCGAAACGCTGCT
TAAAAACGCTGGCTGTGAAGTCATCACGGCGATAGACGGTTTCGACGCACTGGCCAAAATTGCCGATAACCACCCGCGCA
TCATATTCGTCGATATCATGATGCCGCGCCTGGACGGCTATCAGACCTGTGCACTGATCAAGAACAACCGCGCATTCAAA
TCGACGCCGGTCATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGTTCCGACCAATT
TCTGACAAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCAATCAAGGCCCATGTGCCCGGCTTCGTTGCCGCAGAACACC
ATCTATCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

91.912

0.699