Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I9H08_RS02065 Genome accession   NZ_CP066263
Coordinates   451704..452114 (+) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas syringae pv. syringae strain Pss9644     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 446704..457114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I9H08_RS02035 (I9H08_02030) - 446705..447709 (-) 1005 WP_003316734.1 aspartate carbamoyltransferase catalytic subunit -
  I9H08_RS02040 (I9H08_02035) pyrR 447722..448234 (-) 513 WP_011266430.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  I9H08_RS02045 (I9H08_02040) ruvX 448333..448773 (-) 441 WP_002551734.1 Holliday junction resolvase RuvX -
  I9H08_RS02050 (I9H08_02045) - 448773..449345 (-) 573 WP_011266431.1 YqgE/AlgH family protein -
  I9H08_RS02055 (I9H08_02050) - 449421..450323 (-) 903 WP_004414710.1 energy transducer TonB -
  I9H08_RS02060 (I9H08_02055) gshB 450490..451449 (-) 960 WP_003316740.1 glutathione synthase -
  I9H08_RS02065 (I9H08_02060) pilG 451704..452114 (+) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  I9H08_RS02070 (I9H08_02065) pilH 452161..452526 (+) 366 WP_003404569.1 twitching motility response regulator PilH -
  I9H08_RS02075 (I9H08_02070) - 452541..453080 (+) 540 WP_003404572.1 chemotaxis protein CheW -
  I9H08_RS02080 (I9H08_02075) - 453131..455173 (+) 2043 WP_103360082.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=518964 I9H08_RS02065 WP_002551738.1 451704..452114(+) (pilG) [Pseudomonas syringae pv. syringae strain Pss9644]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=518964 I9H08_RS02065 WP_002551738.1 451704..452114(+) (pilG) [Pseudomonas syringae pv. syringae strain Pss9644]
ATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACCATCCGCCGCACCGCCGAAACACTGCT
CAAGAACGCAGGCTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAG
TCGACGCCGGTCATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGGTCCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691