Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SA40_RS01630 Genome accession   NC_022443
Coordinates   370737..371582 (+) Length   281 a.a.
NCBI ID   WP_014363379.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus SA40     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 365737..376582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA40_RS01615 (SA40_0313) - 366003..367844 (-) 1842 WP_000077321.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  SA40_RS01620 (SA40_0314) metC 367813..368973 (-) 1161 WP_000175848.1 cystathionine beta-lyase MetC -
  SA40_RS01625 (SA40_0315) - 368970..370073 (-) 1104 WP_000655692.1 PLP-dependent transferase -
  SA40_RS01630 (SA40_0316) spo0J 370737..371582 (+) 846 WP_014363379.1 ParB/RepB/Spo0J family partition protein Regulator
  SA40_RS01635 (SA40_0317) - 371736..372617 (+) 882 WP_000373077.1 mechanosensitive ion channel family protein -
  SA40_RS01640 (SA40_0318) - 372647..372850 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  SA40_RS01645 (SA40_0319) ychF 372862..373959 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  SA40_RS01650 (SA40_0320) istA 374175..375467 (+) 1293 WP_000777467.1 IS21 family transposase -
  SA40_RS01655 (SA40_0321) istB 375460..376221 (+) 762 WP_001066124.1 IS21-like element helper ATPase IstB -
  SA40_RS01660 (SA40_0322) - 376277..376441 (-) 165 WP_001052486.1 hypothetical protein -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32798.76 Da        Isoelectric Point: 9.8609

>NTDB_id=51883 SA40_RS01630 WP_014363379.1 370737..371582(+) (spo0J) [Staphylococcus aureus subsp. aureus SA40]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SEIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=51883 SA40_RS01630 WP_014363379.1 370737..371582(+) (spo0J) [Staphylococcus aureus subsp. aureus SA40]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGGAAATTGCTGGTTTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATAGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAATCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.613

92.883

0.377

Multiple sequence alignment