Detailed information NTG0518550

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: JDU55_RS05300
• Genome accession: NZ_CP066223
• Coordinates: 1102412..1103533 (-)
• Length: 373 a.a.
• NCBI ID: WP_005752146.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain PM-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1097412..1108533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JDU55_RS05285	tal	1098232..1099185 (-)	954	WP_005752148.1	transaldolase	-
JDU55_RS05290	-	1099343..1099894 (+)	552	WP_005724442.1	DNA-3-methyladenine glycosylase I	-
JDU55_RS05295	lptD	1099958..1102306 (+)	2349	WP_005752147.1	LPS assembly protein LptD	-
JDU55_RS05300	dprA	1102412..1103533 (-)	1122	WP_005752146.1	DNA-processing protein DprA	Machinery gene
JDU55_RS05305	-	1103687..1104280 (-)	594	WP_005718382.1	cytochrome c3 family protein	-
JDU55_RS05310	-	1104296..1104721 (-)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
JDU55_RS05315	napH	1104727..1105602 (-)	876	WP_198684251.1	quinol dehydrogenase ferredoxin subunit NapH	-
JDU55_RS05320	napG	1105602..1106354 (-)	753	WP_005752143.1	ferredoxin-type protein NapG	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41494.69 Da
• Isoelectric Point: 6.2630

>NTDB_id=518550 JDU55_RS05300 WP_005752146.1 1102412..1103533(-) (dprA) [Pasteurella multocida strain PM-1]
MSSYLPLLLRLLQIPRLGSLAILHLLEHVSPAELMEYDTKAFQQIGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIENQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTGTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=518550 JDU55_RS05300 WP_005752146.1 1102412..1103533(-) (dprA) [Pasteurella multocida strain PM-1]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCTGCATTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCAGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAAAATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCTCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTGTCTTTGGGTACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATAAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAAGTAACAGGCACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATCTACCTAT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (319-367)

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.811	99.196	0.603
dprA	Glaesserella parasuis strain SC1401	52.571	93.834	0.493
dprA	Vibrio cholerae strain A1552	45.722	100	0.458
dprA	Vibrio campbellii strain DS40M4	45.405	99.196	0.45
dprA	Legionella pneumophila strain ERS1305867	40.162	99.464	0.399