Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JD965_RS04695 Genome accession   NZ_CP066219
Coordinates   901020..901811 (+) Length   263 a.a.
NCBI ID   WP_016936720.1    Uniprot ID   A0AAE2NZK7
Organism   Bacillus siamensis strain B28     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 896020..906811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JD965_RS04665 (JD965_04665) - 896453..897805 (-) 1353 WP_198697935.1 IS1182 family transposase -
  JD965_RS04670 (JD965_04670) - 898017..898901 (+) 885 WP_198698571.1 PhzF family phenazine biosynthesis isomerase -
  JD965_RS04675 (JD965_04675) - 898978..899562 (+) 585 WP_198698572.1 nitroreductase -
  JD965_RS04680 (JD965_04680) - 899601..899792 (-) 192 WP_016936722.1 YfhD family protein -
  JD965_RS04685 (JD965_04685) - 899862..899972 (-) 111 WP_003155504.1 YfhE family protein -
  JD965_RS04690 (JD965_04690) - 900030..900929 (-) 900 WP_198698573.1 TIGR01777 family oxidoreductase -
  JD965_RS04695 (JD965_04695) recX 901020..901811 (+) 792 WP_016936720.1 recombination regulator RecX Regulator
  JD965_RS04700 (JD965_04700) - 901818..902132 (+) 315 WP_198698574.1 YfhH family protein -
  JD965_RS04705 (JD965_04705) - 902275..903468 (+) 1194 WP_198698945.1 MFS transporter -
  JD965_RS04710 (JD965_04710) - 903644..903796 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  JD965_RS04715 (JD965_04715) - 903920..904189 (+) 270 WP_016936717.1 YfhJ family protein -
  JD965_RS04720 (JD965_04720) - 904323..904850 (+) 528 WP_016936716.1 SH3 domain-containing protein -
  JD965_RS04725 (JD965_04725) - 904936..905268 (+) 333 WP_016936715.1 SdpI family protein -
  JD965_RS04730 (JD965_04730) - 905265..906125 (+) 861 WP_016936714.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31044.32 Da        Isoelectric Point: 6.2747

>NTDB_id=518481 JD965_RS04695 WP_016936720.1 901020..901811(+) (recX) [Bacillus siamensis strain B28]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDEVKKAFNRAVDFLSYRMRSEKEV
RDHLKKKETPEMVIPEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKIHGEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=518481 JD965_RS04695 WP_016936720.1 901020..901811(+) (recX) [Bacillus siamensis strain B28]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAACACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTCGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGCGATGAAGTGAAAAAAGCCTTTAACCGCGCCGTAGATTTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGACCATCTGAAGAAAAAAGAAACACCTGAGATGGTCATTCCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCAAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGGAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTTCCATTCGACGTCATCAACGCCGCCCTGGAGCAGACGGAGTATGAGAATGATGACGAAGCTG
AGATGGAAGCCCTGAAGATTCATGGGGAAAAGGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGAACAATTTTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.848

100

0.798