Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JC776_RS15065 Genome accession   NZ_CP066194
Coordinates   2947420..2947878 (-) Length   152 a.a.
NCBI ID   WP_087095284.1    Uniprot ID   -
Organism   Bacillus cytotoxicus strain E8.1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2942420..2952878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JC776_RS15040 (JC776_15040) - 2943908..2944423 (+) 516 WP_012095159.1 hypothetical protein -
  JC776_RS15045 (JC776_15045) - 2944451..2944684 (-) 234 WP_012095158.1 phage holin -
  JC776_RS15050 (JC776_15050) - 2944847..2945503 (+) 657 WP_012095157.1 diguanylate cyclase -
  JC776_RS15055 (JC776_15055) - 2945900..2946724 (+) 825 WP_087095286.1 peptidoglycan-N-acetylglucosamine deacetylase -
  JC776_RS15060 (JC776_15060) - 2946741..2947397 (+) 657 WP_087095285.1 YkyA family protein -
  JC776_RS15065 (JC776_15065) kre 2947420..2947878 (-) 459 WP_087095284.1 YkyB family protein Regulator
  JC776_RS15070 (JC776_15070) - 2948060..2949598 (+) 1539 WP_012095153.1 Ppx/GppA family phosphatase -
  JC776_RS15075 (JC776_15075) - 2949707..2951815 (+) 2109 WP_012095152.1 RNA degradosome polyphosphate kinase -
  JC776_RS15080 (JC776_15080) - 2952010..2952228 (-) 219 WP_012095151.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17624.34 Da        Isoelectric Point: 10.8395

>NTDB_id=518412 JC776_RS15065 WP_087095284.1 2947420..2947878(-) (kre) [Bacillus cytotoxicus strain E8.1]
MKQSHPQSHSPKQYSVNQLAQSIFVVNRHAKAATNPKYLYWLKKVALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKADFRTLPHLGALESSYRNPKTTLSLTTAKKTLQNFIGPEALTQEKKLSEAIPWYRRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=518412 JC776_RS15065 WP_087095284.1 2947420..2947878(-) (kre) [Bacillus cytotoxicus strain E8.1]
ATGAAACAATCCCACCCTCAATCTCATTCACCAAAACAATATTCTGTTAATCAATTAGCTCAATCTATTTTTGTTGTAAA
TCGTCATGCAAAGGCAGCTACAAATCCTAAATATTTATATTGGTTAAAAAAAGTTGCTTTAGAGCGACTAATTGCTGAAA
AAAAGGCGATTAAAGAAGGTCTACATTTTTCTCGAAATCCACGCTTCAGTCAACAACAGTCTGACGTCTTGATCCGTCTA
GGTGATTACTTTTTCCATATCCCTCCCACAAAAGCTGATTTTCGTACTCTCCCACATCTTGGTGCTCTTGAATCTTCCTA
TCGTAATCCCAAAACTACCCTTTCTTTAACAACAGCAAAGAAGACTCTTCAAAATTTCATCGGTCCTGAAGCCTTAACAC
AAGAAAAAAAATTGAGCGAAGCTATTCCGTGGTATCGACGTACGTACACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487