Detailed information NTG0518396

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: JC776_RS09665
• Genome accession: NZ_CP066194
• Coordinates: 1935643..1936989 (+)
• Length: 448 a.a.
• NCBI ID: WP_109090172.1
• Uniprot ID: -
• Organism: Bacillus cytotoxicus strain E8.1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1930643..1941989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JC776_RS09645 (JC776_09645)	-	1931545..1932183 (-)	639	WP_012096185.1	YigZ family protein	-
JC776_RS09650 (JC776_09650)	-	1932574..1933416 (+)	843	WP_094374349.1	DegV family protein	-
JC776_RS09655 (JC776_09655)	-	1933701..1934015 (+)	315	WP_012096183.1	helix-turn-helix domain-containing protein	-
JC776_RS09660 (JC776_09660)	-	1934285..1935514 (+)	1230	WP_012096182.1	C40 family peptidase	-
JC776_RS09665 (JC776_09665)	comFA	1935643..1936989 (+)	1347	WP_109090172.1	DEAD/DEAH box helicase	Machinery gene
JC776_RS09670 (JC776_09670)	-	1936989..1937693 (+)	705	WP_012096180.1	ComF family protein	-
JC776_RS09675 (JC776_09675)	-	1937816..1938013 (+)	198	WP_012096179.1	cold shock domain-containing protein	-
JC776_RS09680 (JC776_09680)	raiA	1938368..1938907 (+)	540	WP_012096178.1	ribosome-associated translation inhibitor RaiA	-
JC776_RS09685 (JC776_09685)	secA	1939270..1941780 (+)	2511	WP_012096177.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 51334.14 Da
• Isoelectric Point: 9.6726

>NTDB_id=518396 JC776_RS09665 WP_109090172.1 1935643..1936989(+) (comFA) [Bacillus cytotoxicus strain E8.1]
MQKGRQMLLHELSWSKEQLHDFISRGEIVLEKGIVRKSSNYICQRCGNQEKRLFASFLCKRCNQVCAYCRKCIMMGRVSE
CTMLVRSVCEGKQECFPHALQWKGVLSPGQNRAAKGVVEAIKQKESFFIWAVCGAGKTEMLFSGIDEALKNGKRVCIATP
RKDVVLELAPRLQEVFPDIPFATLYGGSKEYEKEAMLIVTTTHQLLRYYRAFDVMIIDEIDAFPYAMDHMLHEAVRKAAK
EDASYIYLTATPEEKWKQSVQNGKQKGVIISGRYHRHPLPVPKLKWCGNWRKLLRRKQIPQVLLDWLLIYLQKHYPIFLF
VPHICYVEEVTAVLQRLHHKIAGVHAEDPMRKEKVEAFRKGDIPLLITTTILERGVTVTNLQVAVLGAEEDIFSESALVQ
IAGRVGRSSHNPKGEVIYFHYGKTKAMTAAKKHIQFMNKRAKQEGLID

Nucleotide

• Length: 1347 bp

>NTDB_id=518396 JC776_RS09665 WP_109090172.1 1935643..1936989(+) (comFA) [Bacillus cytotoxicus strain E8.1]
ATACAAAAAGGAAGACAAATGTTATTGCATGAACTTTCATGGTCAAAAGAACAGTTGCACGATTTCATAAGTAGAGGGGA
GATTGTATTAGAAAAAGGGATTGTTCGAAAAAGTTCCAATTATATATGCCAACGTTGCGGGAATCAAGAGAAACGTCTAT
TTGCATCATTTTTATGCAAAAGGTGTAATCAAGTATGTGCGTATTGCCGGAAGTGTATTATGATGGGACGAGTAAGCGAA
TGTACGATGCTTGTTCGAAGTGTTTGCGAAGGGAAACAAGAATGTTTTCCTCATGCCTTGCAGTGGAAAGGAGTATTGTC
ACCGGGGCAAAATAGGGCTGCAAAAGGGGTAGTAGAAGCAATTAAACAGAAAGAGTCCTTTTTTATTTGGGCGGTATGTG
GTGCTGGAAAAACGGAGATGTTGTTTTCTGGCATAGATGAAGCGCTTAAAAACGGTAAGCGAGTTTGTATAGCGACGCCT
CGAAAAGATGTTGTATTAGAATTAGCTCCACGACTACAAGAAGTGTTTCCAGATATACCATTTGCGACATTATACGGAGG
CAGTAAAGAATATGAAAAAGAAGCGATGCTTATCGTAACTACAACTCATCAGTTGCTTCGCTATTATAGGGCGTTTGATG
TCATGATTATAGATGAAATTGATGCTTTTCCGTATGCGATGGATCATATGTTACATGAGGCCGTAAGAAAAGCGGCGAAG
GAGGATGCTTCCTATATTTATTTAACAGCAACTCCAGAAGAGAAATGGAAACAGAGTGTGCAAAATGGTAAACAAAAAGG
TGTTATTATATCAGGACGTTATCATCGCCATCCATTACCGGTTCCTAAATTAAAATGGTGTGGAAATTGGAGAAAACTAC
TTCGACGTAAACAAATTCCTCAAGTTCTATTGGACTGGCTTCTTATATATCTACAAAAACATTATCCTATCTTTTTATTT
GTTCCTCATATTTGTTATGTAGAGGAAGTAACGGCTGTGTTACAAAGATTACATCATAAAATTGCTGGTGTTCATGCAGA
AGATCCAATGAGAAAAGAGAAAGTAGAGGCATTTCGTAAAGGGGATATACCACTACTCATAACTACAACTATATTGGAGA
GAGGGGTAACGGTCACGAATTTACAAGTAGCTGTGCTAGGAGCAGAAGAGGATATTTTTTCTGAAAGTGCACTGGTTCAG
ATAGCGGGCCGCGTTGGTAGAAGTTCTCACAATCCAAAGGGGGAAGTCATTTATTTTCATTATGGAAAAACGAAAGCAAT
GACTGCTGCGAAAAAGCATATTCAATTTATGAATAAAAGGGCTAAACAAGAAGGGTTGATAGATTGA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (106-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.569	97.991	0.496