Detailed information NTG0518368

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: JC775_RS19330
• Genome accession: NZ_CP066192
• Coordinates: 3832094..3833440 (-)
• Length: 448 a.a.
• NCBI ID: WP_109090172.1
• Uniprot ID: -
• Organism: Bacillus cytotoxicus strain E17.4
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3827094..3838440

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JC775_RS19310 (JC775_19310)	secA	3827303..3829813 (-)	2511	WP_012096177.1	preprotein translocase subunit SecA	-
JC775_RS19315 (JC775_19315)	raiA	3830176..3830715 (-)	540	WP_012096178.1	ribosome-associated translation inhibitor RaiA	-
JC775_RS19320 (JC775_19320)	-	3831070..3831267 (-)	198	WP_012096179.1	cold shock domain-containing protein	-
JC775_RS19325 (JC775_19325)	-	3831390..3832094 (-)	705	WP_012096180.1	ComF family protein	-
JC775_RS19330 (JC775_19330)	comFA	3832094..3833440 (-)	1347	WP_109090172.1	DEAD/DEAH box helicase	Machinery gene
JC775_RS19335 (JC775_19335)	-	3833569..3834798 (-)	1230	WP_012096182.1	C40 family peptidase	-
JC775_RS19340 (JC775_19340)	-	3835068..3835382 (-)	315	WP_012096183.1	helix-turn-helix domain-containing protein	-
JC775_RS19345 (JC775_19345)	-	3835667..3836509 (-)	843	WP_094374349.1	DegV family protein	-
JC775_RS19350 (JC775_19350)	-	3836900..3837538 (+)	639	WP_012096185.1	YigZ family protein	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 51334.14 Da
• Isoelectric Point: 9.6726

>NTDB_id=518368 JC775_RS19330 WP_109090172.1 3832094..3833440(-) (comFA) [Bacillus cytotoxicus strain E17.4]
MQKGRQMLLHELSWSKEQLHDFISRGEIVLEKGIVRKSSNYICQRCGNQEKRLFASFLCKRCNQVCAYCRKCIMMGRVSE
CTMLVRSVCEGKQECFPHALQWKGVLSPGQNRAAKGVVEAIKQKESFFIWAVCGAGKTEMLFSGIDEALKNGKRVCIATP
RKDVVLELAPRLQEVFPDIPFATLYGGSKEYEKEAMLIVTTTHQLLRYYRAFDVMIIDEIDAFPYAMDHMLHEAVRKAAK
EDASYIYLTATPEEKWKQSVQNGKQKGVIISGRYHRHPLPVPKLKWCGNWRKLLRRKQIPQVLLDWLLIYLQKHYPIFLF
VPHICYVEEVTAVLQRLHHKIAGVHAEDPMRKEKVEAFRKGDIPLLITTTILERGVTVTNLQVAVLGAEEDIFSESALVQ
IAGRVGRSSHNPKGEVIYFHYGKTKAMTAAKKHIQFMNKRAKQEGLID

Nucleotide

• Length: 1347 bp

>NTDB_id=518368 JC775_RS19330 WP_109090172.1 3832094..3833440(-) (comFA) [Bacillus cytotoxicus strain E17.4]
ATACAAAAAGGAAGACAAATGTTATTGCATGAACTTTCATGGTCAAAAGAACAGTTGCACGATTTCATAAGTAGAGGGGA
GATTGTATTAGAAAAAGGGATTGTTCGAAAAAGTTCCAATTATATATGCCAACGTTGCGGGAATCAAGAGAAACGTCTAT
TTGCATCATTTTTATGCAAAAGGTGTAATCAAGTATGTGCGTATTGCCGGAAGTGTATTATGATGGGACGAGTAAGCGAA
TGTACGATGCTTGTTCGAAGTGTTTGCGAAGGGAAACAAGAATGTTTTCCTCATGCCTTGCAGTGGAAAGGAGTATTGTC
ACCGGGGCAAAATAGGGCTGCAAAAGGGGTAGTAGAAGCAATTAAACAGAAAGAGTCCTTTTTTATTTGGGCGGTATGTG
GTGCTGGAAAAACGGAGATGTTGTTTTCTGGCATAGATGAAGCGCTTAAAAACGGTAAGCGAGTTTGTATAGCGACGCCT
CGAAAAGATGTTGTATTAGAATTAGCTCCACGACTACAAGAAGTGTTTCCAGATATACCATTTGCGACATTATACGGAGG
CAGTAAAGAATATGAAAAAGAAGCGATGCTTATCGTAACTACAACTCATCAGTTGCTTCGCTATTATAGGGCGTTTGATG
TCATGATTATAGATGAAATTGATGCTTTTCCGTATGCGATGGATCATATGTTACATGAGGCCGTAAGAAAAGCGGCGAAG
GAGGATGCTTCCTATATTTATTTAACAGCAACTCCAGAAGAGAAATGGAAACAGAGTGTGCAAAATGGTAAACAAAAAGG
TGTTATTATATCAGGACGTTATCATCGCCATCCATTACCGGTTCCTAAATTAAAATGGTGTGGAAATTGGAGAAAACTAC
TTCGACGTAAACAAATTCCTCAAGTTCTATTGGACTGGCTTCTTATATATCTACAAAAACATTATCCTATCTTTTTATTT
GTTCCTCATATTTGTTATGTAGAGGAAGTAACGGCTGTGTTACAAAGATTACATCATAAAATTGCTGGTGTTCATGCAGA
AGATCCAATGAGAAAAGAGAAAGTAGAGGCATTTCGTAAAGGGGATATACCACTACTCATAACTACAACTATATTGGAGA
GAGGGGTAACGGTCACGAATTTACAAGTAGCTGTGCTAGGAGCAGAAGAGGATATTTTTTCTGAAAGTGCACTGGTTCAG
ATAGCGGGCCGCGTTGGTAGAAGTTCTCACAATCCAAAGGGGGAAGTCATTTATTTTCATTATGGAAAAACGAAAGCAAT
GACTGCTGCGAAAAAGCATATTCAATTTATGAATAAAAGGGCTAAACAAGAAGGGTTGATAGATTGA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (106-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.569	97.991	0.496