Detailed information NTG0518354

Bioinformatically predicted

Overview

• Name: spo0A
• Type: Regulator
• Locus tag: JC775_RS15105
• Genome accession: NZ_CP066192
• Coordinates: 3008755..3009549 (-)
• Length: 264 a.a.
• NCBI ID: WP_012095325.1
• Uniprot ID: -
• Organism: Bacillus cytotoxicus strain E17.4
• Function: activation and repression of comK; repression of rok; repression of abrB (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2999859..3010764	3008755..3009549	within	0
IScluster/Tn	3001619..3011204	3008755..3009549	within	0

Gene organization within MGE regions

Location: 2999859..3011204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JC775_RS15055 (JC775_15055)	-	2999859..3000092 (+)	234	WP_012095322.1	DUF2627 domain-containing protein	-
JC775_RS15060 (JC775_15060)	-	3000189..3000917 (-)	729	WP_012095323.1	glycerophosphodiester phosphodiesterase	-
JC775_RS15065 (JC775_15065)	-	3000967..3001113 (+)	147	WP_012095324.1	YycC family protein	-
JC775_RS15070 (JC775_15070)	tnpA	3001542..3001984 (-)	443	Protein_2969	IS200/IS605 family transposase	-
JC775_RS15075 (JC775_15075)	-	3002284..3004773 (-)	2490	WP_087099099.1	FtsX-like permease family protein	-
JC775_RS15080 (JC775_15080)	-	3004770..3005531 (-)	762	WP_087099101.1	ABC transporter ATP-binding protein	-
JC775_RS15085 (JC775_15085)	-	3005553..3006248 (-)	696	WP_242136512.1	ABC transporter ATP-binding protein	-
JC775_RS15095 (JC775_15095)	-	3007592..3008140 (-)	549	WP_242136721.1	hypothetical protein	-
JC775_RS20840	-	3008437..3008622 (-)	186	WP_242136722.1	hypothetical protein	-
JC775_RS15105 (JC775_15105)	spo0A	3008755..3009549 (-)	795	WP_012095325.1	sporulation transcription factor Spo0A	Regulator

Sequence

Protein

• Length: 264 a.a.
• Molecular weight: 29453.21 Da
• Isoelectric Point: 7.4717

>NTDB_id=518354 JC775_RS15105 WP_012095325.1 3008755..3009549(-) (spo0A) [Bacillus cytotoxicus strain E17.4]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKEKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKTNAAIKRPLPSFRSVTTADGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide

• Length: 795 bp

>NTDB_id=518354 JC775_RS15105 WP_012095325.1 3008755..3009549(-) (spo0A) [Bacillus cytotoxicus strain E17.4]
GTGGAGAAAATCAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCAATGCTAGAAAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTAATCGGAACGGCTTATAATGGTCAAGAATGTTTAAATTTATTAAAAGAAAAACAACCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGCCTAGCAGTACTGGAGAAAATGCGACATATTGAACGACTAAAACAACCG
AATGTTATTATGTTAACAGCATTTGGGCAAGAAGATGTGACAAAGAAAGCAGTTGATCTAGGAGCTTCTTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTAAGTGGTAAAACAAATGCTGCGATAAAACGCCCAC
TACCATCTTTCCGATCGGTAACAACAGCAGATGGAAAACCGAAAAATTTAGATGCGAGTATTACGAGCATTATTCACGAA
ATTGGTGTCCCAGCTCATATTAAAGGATATATGTATTTACGCGAAGCAATTTCTATGGTGTACAACGACATTGAGTTGTT
AGGATCTATTACGAAAGTATTATATCCAGATATCGCTAAGAAATATAATACAACTGCAAGTCGTGTGGAACGTGCAATTC
GACATGCGATTGAAGTAGCATGGAGCCGTGGGAATATTGATTCTATCTCATCTTTATTCGGTTATACCGTATCCATGTCA
AAAGCAAAACCGACGAATTCCGAATTTATTGCAATGGTTGCGGATAAATTGAGACTTGAACATAAGGCGAGTTGA

Domains

Predicted by InterproScan.

• Sporulation initiation factor Spo0A C terminal (Spo0A_C) (154-257)

• Response regulator receiver domain (Response_reg) (6-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
spo0A	Bacillus subtilis subsp. subtilis str. 168	81.648	100	0.826