Detailed information NTG0518292

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: JC772_RS06430
• Genome accession: NZ_CP066187
• Coordinates: 1218968..1220314 (-)
• Length: 448 a.a.
• NCBI ID: WP_109090172.1
• Uniprot ID: -
• Organism: Bacillus cytotoxicus strain E28.3
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1213968..1225314

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JC772_RS06410 (JC772_06410)	secA	1214177..1216687 (-)	2511	WP_012096177.1	preprotein translocase subunit SecA	-
JC772_RS06415 (JC772_06415)	raiA	1217050..1217589 (-)	540	WP_012096178.1	ribosome-associated translation inhibitor RaiA	-
JC772_RS06420 (JC772_06420)	-	1217944..1218141 (-)	198	WP_012096179.1	cold shock domain-containing protein	-
JC772_RS06425 (JC772_06425)	-	1218264..1218968 (-)	705	WP_012096180.1	ComF family protein	-
JC772_RS06430 (JC772_06430)	comFA	1218968..1220314 (-)	1347	WP_109090172.1	DEAD/DEAH box helicase	Machinery gene
JC772_RS06435 (JC772_06435)	-	1220443..1221672 (-)	1230	WP_210370226.1	C40 family peptidase	-
JC772_RS06440 (JC772_06440)	-	1221942..1222256 (-)	315	WP_012096183.1	helix-turn-helix domain-containing protein	-
JC772_RS06445 (JC772_06445)	-	1222541..1223383 (-)	843	WP_094374349.1	DegV family protein	-
JC772_RS06450 (JC772_06450)	-	1223774..1224412 (+)	639	WP_012096185.1	YigZ family protein	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 51334.14 Da
• Isoelectric Point: 9.6726

>NTDB_id=518292 JC772_RS06430 WP_109090172.1 1218968..1220314(-) (comFA) [Bacillus cytotoxicus strain E28.3]
MQKGRQMLLHELSWSKEQLHDFISRGEIVLEKGIVRKSSNYICQRCGNQEKRLFASFLCKRCNQVCAYCRKCIMMGRVSE
CTMLVRSVCEGKQECFPHALQWKGVLSPGQNRAAKGVVEAIKQKESFFIWAVCGAGKTEMLFSGIDEALKNGKRVCIATP
RKDVVLELAPRLQEVFPDIPFATLYGGSKEYEKEAMLIVTTTHQLLRYYRAFDVMIIDEIDAFPYAMDHMLHEAVRKAAK
EDASYIYLTATPEEKWKQSVQNGKQKGVIISGRYHRHPLPVPKLKWCGNWRKLLRRKQIPQVLLDWLLIYLQKHYPIFLF
VPHICYVEEVTAVLQRLHHKIAGVHAEDPMRKEKVEAFRKGDIPLLITTTILERGVTVTNLQVAVLGAEEDIFSESALVQ
IAGRVGRSSHNPKGEVIYFHYGKTKAMTAAKKHIQFMNKRAKQEGLID

Nucleotide

• Length: 1347 bp

>NTDB_id=518292 JC772_RS06430 WP_109090172.1 1218968..1220314(-) (comFA) [Bacillus cytotoxicus strain E28.3]
ATACAAAAAGGAAGACAAATGTTATTGCATGAACTTTCATGGTCAAAAGAACAGTTGCACGATTTCATAAGTAGAGGGGA
GATTGTATTAGAAAAAGGGATTGTTCGAAAAAGTTCCAATTATATATGCCAACGTTGCGGGAATCAAGAGAAACGTCTAT
TTGCATCATTTTTATGCAAAAGGTGTAATCAAGTATGTGCGTATTGCCGGAAGTGTATTATGATGGGACGAGTAAGCGAA
TGTACGATGCTTGTTCGAAGTGTTTGCGAAGGGAAACAAGAATGTTTTCCTCATGCCTTGCAGTGGAAAGGAGTATTGTC
ACCGGGGCAAAATAGGGCTGCAAAAGGGGTAGTAGAAGCAATTAAACAGAAAGAGTCCTTTTTTATTTGGGCGGTATGTG
GTGCTGGAAAAACGGAGATGTTGTTTTCTGGCATAGATGAAGCGCTTAAAAACGGTAAGCGAGTTTGTATAGCGACGCCT
CGAAAAGATGTTGTATTAGAATTAGCTCCACGACTACAAGAAGTGTTTCCAGATATACCATTTGCGACATTATACGGAGG
CAGTAAAGAATATGAAAAAGAAGCGATGCTTATCGTAACTACAACTCATCAGTTGCTTCGCTATTATAGGGCGTTTGATG
TCATGATTATAGATGAAATTGATGCTTTTCCGTATGCGATGGATCATATGTTACATGAGGCCGTAAGAAAAGCGGCGAAG
GAGGATGCTTCCTATATTTATTTAACAGCAACTCCAGAAGAGAAATGGAAACAGAGTGTGCAAAATGGTAAACAAAAAGG
TGTTATTATATCAGGACGTTATCATCGCCATCCATTACCGGTTCCTAAATTAAAATGGTGTGGAAATTGGAGAAAACTAC
TTCGACGTAAACAAATTCCTCAAGTTCTATTGGACTGGCTTCTTATATATCTACAAAAACATTATCCTATCTTTTTATTT
GTTCCTCATATTTGTTATGTAGAGGAAGTAACGGCTGTGTTACAAAGATTACATCATAAAATTGCTGGTGTTCATGCAGA
AGATCCAATGAGAAAAGAGAAAGTAGAGGCATTTCGTAAAGGGGATATACCACTACTCATAACTACAACTATATTGGAGA
GAGGGGTAACGGTCACGAATTTACAAGTAGCTGTGCTAGGAGCAGAAGAGGATATTTTTTCTGAAAGTGCACTGGTTCAG
ATAGCGGGCCGCGTTGGTAGAAGTTCTCACAATCCAAAGGGGGAAGTCATTTATTTTCATTATGGAAAAACGAAAGCAAT
GACTGCTGCGAAAAAGCATATTCAATTTATGAATAAAAGGGCTAAACAAGAAGGGTTGATAGATTGA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (106-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.569	97.991	0.496