Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JC773_RS20445 Genome accession   NZ_CP066185
Coordinates   4026107..4026565 (+) Length   152 a.a.
NCBI ID   WP_012095154.1    Uniprot ID   A7GS23
Organism   Bacillus cytotoxicus strain PDT2.12     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4021107..4031565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JC773_RS20430 (JC773_20430) - 4021778..4022051 (+) 274 Protein_4008 hypothetical protein -
  JC773_RS22635 (JC773_20435) ppk1 4022190..4024278 (-) 2089 Protein_4009 polyphosphate kinase 1 -
  JC773_RS20440 (JC773_20440) - 4024387..4025925 (-) 1539 WP_012095153.1 Ppx/GppA family phosphatase -
  JC773_RS20445 (JC773_20445) kre 4026107..4026565 (+) 459 WP_012095154.1 YkyB family protein Regulator
  JC773_RS20450 (JC773_20450) - 4026588..4027244 (-) 657 WP_012095155.1 YkyA family protein -
  JC773_RS20455 (JC773_20455) - 4027261..4028085 (-) 825 WP_012095156.1 peptidoglycan-N-acetylglucosamine deacetylase -
  JC773_RS20460 (JC773_20460) - 4028482..4029138 (-) 657 WP_012095157.1 diguanylate cyclase -
  JC773_RS20465 (JC773_20465) - 4029301..4029534 (+) 234 WP_012095158.1 phage holin -
  JC773_RS20470 (JC773_20470) - 4029562..4030077 (-) 516 WP_087099053.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17668.35 Da        Isoelectric Point: 10.7589

>NTDB_id=518271 JC773_RS20445 WP_012095154.1 4026107..4026565(+) (kre) [Bacillus cytotoxicus strain PDT2.12]
MKQSHPQSHSPKQYSVNQLAQSIFVVNRHAKAATNPKYLYWLKKVALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGALESSYRNPKTTLSLTTAKKTLQNFIGPEALTQEKKLSEAIPWYRRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=518271 JC773_RS20445 WP_012095154.1 4026107..4026565(+) (kre) [Bacillus cytotoxicus strain PDT2.12]
ATGAAACAATCCCACCCTCAATCTCATTCACCAAAACAATATTCTGTTAATCAATTAGCTCAATCTATTTTTGTTGTAAA
TCGTCATGCAAAGGCAGCTACAAATCCTAAATATTTATATTGGTTAAAAAAAGTTGCTTTAGAGCGACTAATTGCTGAAA
AAAAGGCGATTAAAGAAGGTCTACATTTTTCTCGAAATCCACGCTTCAGTCAACAACAGTCTGACGTCTTGATCCGTCTA
GGTGATTACTTTTTCCATATTCCTCCCACAAAAGATGATTTTCGTACTCTCCCACATCTTGGTGCTCTTGAATCTTCCTA
TCGTAATCCCAAAACTACCCTTTCTTTAACAACAGCAAAGAAGACTCTTCAAAATTTCATCGGTCCTGAAGCCTTAACAC
AAGAAAAAAAATTAAGCGAAGCTATTCCGTGGTATCGACGTACGTACACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7GS23

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487