Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   JC773_RS10995 Genome accession   NZ_CP066185
Coordinates   2163418..2163591 (+) Length   57 a.a.
NCBI ID   WP_011983978.1    Uniprot ID   A7GM66
Organism   Bacillus cytotoxicus strain PDT2.12     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2158418..2168591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JC773_RS10975 (JC773_10975) clpC 2158753..2161353 (+) 2601 WP_087097969.1 ATP-dependent chaperone ClpB Regulator
  JC773_RS10980 (JC773_10980) - 2161384..2161566 (-) 183 WP_011983975.1 YjzD family protein -
  JC773_RS10985 (JC773_10985) - 2161723..2162457 (+) 735 WP_011983976.1 hydrolase -
  JC773_RS10990 (JC773_10990) - 2162516..2163358 (+) 843 WP_210351452.1 NAD(P)-dependent oxidoreductase -
  JC773_RS10995 (JC773_10995) comZ 2163418..2163591 (+) 174 WP_011983978.1 ComZ family protein Regulator
  JC773_RS11000 (JC773_11000) - 2163782..2164714 (+) 933 WP_011983979.1 beta-ketoacyl-ACP synthase III -
  JC773_RS11005 (JC773_11005) fabF 2164745..2165983 (+) 1239 WP_011983980.1 beta-ketoacyl-ACP synthase II -
  JC773_RS11010 (JC773_11010) - 2166089..2166877 (+) 789 WP_011983981.1 DUF2268 domain-containing protein -
  JC773_RS11015 (JC773_11015) - 2167018..2167764 (+) 747 WP_011983982.1 YjbA family protein -

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6553.74 Da        Isoelectric Point: 4.6653

>NTDB_id=518255 JC773_RS10995 WP_011983978.1 2163418..2163591(+) (comZ) [Bacillus cytotoxicus strain PDT2.12]
MNEKNMQFLQIAMKYLPEAKAILDDHGVALDMEKAQPVLELLMKVMNEAYELGKTEK

Nucleotide


Download         Length: 174 bp        

>NTDB_id=518255 JC773_RS10995 WP_011983978.1 2163418..2163591(+) (comZ) [Bacillus cytotoxicus strain PDT2.12]
ATGAATGAAAAAAATATGCAGTTTTTACAAATCGCAATGAAATATTTACCAGAGGCAAAAGCAATTTTAGATGATCATGG
AGTGGCACTTGATATGGAGAAAGCCCAGCCGGTATTAGAATTGTTAATGAAAGTGATGAATGAAGCATATGAACTAGGCA
AGACAGAAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-56)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7GM66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.182

96.491

0.561