Detailed information NTG0518237

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: JC773_RS04455
• Genome accession: NZ_CP066185
• Coordinates: 847136..848482 (-)
• Length: 448 a.a.
• NCBI ID: WP_210351999.1
• Uniprot ID: -
• Organism: Bacillus cytotoxicus strain PDT2.12
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 842136..853482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JC773_RS04435 (JC773_04435)	secA	842345..844855 (-)	2511	WP_210351849.1	preprotein translocase subunit SecA	-
JC773_RS04440 (JC773_04440)	raiA	845218..845757 (-)	540	WP_012096178.1	ribosome-associated translation inhibitor RaiA	-
JC773_RS04445 (JC773_04445)	-	846112..846309 (-)	198	WP_012096179.1	cold shock domain-containing protein	-
JC773_RS04450 (JC773_04450)	-	846432..847136 (-)	705	WP_012096180.1	ComF family protein	-
JC773_RS04455 (JC773_04455)	comFA	847136..848482 (-)	1347	WP_210351999.1	DEAD/DEAH box helicase	Machinery gene
JC773_RS04460 (JC773_04460)	-	848611..849840 (-)	1230	WP_012096182.1	C40 family peptidase	-
JC773_RS04465 (JC773_04465)	-	850110..850424 (-)	315	WP_012096183.1	helix-turn-helix domain-containing protein	-
JC773_RS04470 (JC773_04470)	-	850709..851551 (-)	843	WP_012096184.1	DegV family protein	-
JC773_RS04475 (JC773_04475)	-	851942..852580 (+)	639	WP_012096185.1	YigZ family protein	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 51364.17 Da
• Isoelectric Point: 9.6028

>NTDB_id=518237 JC773_RS04455 WP_210351999.1 847136..848482(-) (comFA) [Bacillus cytotoxicus strain PDT2.12]
MQKGRQMLLHELSWSKEQLHDFISRGEIVLEKGIVRKSSNYICQRCGNQEKRLFASFLCKRCNQVCAYCWKCIMMGRVSE
CTMLVRSVCEGKQECFPHALQWKGVLSPGQNRAAKGVVEAIKQKESFFIWAVCGAGKTEMLFSGIDEALKNGKRVCIATP
RKDVVLELAPRLQEVFPDIPFATLYGGSKEYEKEAMLIVTTTHQLLRYYRAFDVMIIDEIDAFPYAMDHMLHEAVRKAAK
EDASYIYLTATPEEKWKQSVQNGKQKGVIISGRYHRHPLPVPKLKWCGNWRKLLRRKQIPQVLLDWLLIYLQKHYPIFLF
VPHICYVEEVTAVLQRLHHKIAGVHAEDPMRKEKVEAFRKGDIPLLITTTILERGVTVTNLQVAVLGAEEDIFSESALVQ
IAGRVGRSSHNPKGEVIYFHYGKTKAMTAAKKHIQFMNKRAKQEGLID

Nucleotide

• Length: 1347 bp

>NTDB_id=518237 JC773_RS04455 WP_210351999.1 847136..848482(-) (comFA) [Bacillus cytotoxicus strain PDT2.12]
ATACAAAAAGGAAGACAAATGTTATTGCATGAACTTTCATGGTCAAAAGAACAGTTGCACGATTTCATAAGTAGAGGGGA
GATTGTATTAGAAAAAGGGATTGTTCGAAAAAGTTCCAATTATATATGCCAACGTTGCGGGAATCAAGAGAAACGTCTAT
TTGCATCATTTTTATGCAAAAGGTGTAATCAAGTATGTGCGTATTGCTGGAAGTGTATTATGATGGGACGAGTAAGCGAA
TGTACGATGCTTGTTCGAAGTGTTTGCGAAGGGAAACAAGAATGTTTTCCTCATGCCTTGCAGTGGAAAGGAGTATTGTC
ACCGGGGCAAAATAGGGCTGCAAAAGGGGTAGTAGAAGCAATTAAACAGAAAGAGTCCTTTTTTATTTGGGCGGTATGTG
GTGCTGGAAAAACGGAGATGTTGTTTTCTGGCATAGATGAAGCGCTTAAAAACGGTAAGCGAGTTTGTATAGCGACGCCT
CGAAAAGATGTTGTATTAGAATTAGCTCCACGACTACAAGAAGTGTTTCCAGATATACCATTTGCGACATTATACGGAGG
CAGTAAAGAATATGAAAAAGAAGCGATGCTTATCGTAACTACAACTCATCAGTTGCTTCGCTATTATAGGGCGTTTGATG
TCATGATTATAGATGAAATTGATGCTTTTCCGTATGCGATGGATCATATGTTACATGAGGCCGTAAGAAAAGCGGCGAAG
GAGGATGCTTCCTATATTTATTTAACAGCAACTCCAGAAGAGAAATGGAAACAGAGTGTGCAAAATGGTAAACAAAAAGG
TGTTATTATATCAGGACGTTATCATCGCCATCCATTACCGGTTCCTAAATTAAAATGGTGTGGAAATTGGAGAAAACTAC
TTCGACGTAAACAAATTCCTCAAGTTCTATTGGACTGGCTTCTTATATATCTACAAAAACATTATCCTATCTTTTTATTT
GTTCCTCATATTTGTTATGTAGAGGAAGTAACGGCTGTGTTACAAAGATTACATCATAAAATTGCTGGTGTTCATGCAGA
AGATCCAATGAGAAAAGAGAAAGTAGAGGCATTTCGTAAAGGGGATATACCACTACTCATAACTACAACTATATTGGAGA
GAGGGGTAACGGTCACGAATTTACAAGTAGCTGTGCTAGGAGCAGAAGAGGATATTTTTTCTGAAAGTGCACTGGTTCAG
ATAGCGGGCCGCGTTGGTAGAAGTTCTCACAATCCAAAGGGGGAAGTCATTTATTTTCATTATGGAAAAACGAAAGCAAT
GACTGCTGCGAAAAAGCATATTCAATTTATGAATAAAAGGGCTAAACAAGAAGGGTTGATAGATTGA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (106-253)

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.342	97.991	0.493