Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | JDY60_RS05210 | Genome accession | NZ_CP066172 |
| Coordinates | 1081970..1084228 (+) | Length | 752 a.a. |
| NCBI ID | WP_200370200.1 | Uniprot ID | - |
| Organism | Streptococcus oralis strain SF100 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1076970..1089228
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JDY60_RS05180 (JDY60_05180) | - | 1077756..1078529 (-) | 774 | WP_200370198.1 | HAD hydrolase family protein | - |
| JDY60_RS05185 (JDY60_05185) | - | 1078534..1079391 (-) | 858 | WP_000057225.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| JDY60_RS05190 (JDY60_05190) | - | 1079540..1079860 (-) | 321 | WP_200370199.1 | TfoX/Sxy family protein | - |
| JDY60_RS05195 (JDY60_05195) | - | 1079894..1080628 (-) | 735 | WP_000140925.1 | amino acid ABC transporter ATP-binding protein | - |
| JDY60_RS05200 (JDY60_05200) | - | 1080628..1081311 (-) | 684 | WP_001011622.1 | amino acid ABC transporter permease | - |
| JDY60_RS05205 (JDY60_05205) | - | 1081503..1081733 (+) | 231 | WP_000443577.1 | DUF1797 family protein | - |
| JDY60_RS05210 (JDY60_05210) | clpE | 1081970..1084228 (+) | 2259 | WP_200370200.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| JDY60_RS05215 (JDY60_05215) | - | 1084359..1084811 (+) | 453 | WP_200370201.1 | NUDIX hydrolase | - |
| JDY60_RS05220 (JDY60_05220) | - | 1084870..1085169 (+) | 300 | WP_000767205.1 | DUF1827 family protein | - |
| JDY60_RS05225 (JDY60_05225) | metK | 1085240..1086430 (-) | 1191 | WP_200370202.1 | methionine adenosyltransferase | - |
| JDY60_RS05230 (JDY60_05230) | - | 1086628..1087971 (-) | 1344 | WP_002879919.1 | DEAD/DEAH box helicase | - |
| JDY60_RS05235 (JDY60_05235) | - | 1088104..1088919 (-) | 816 | WP_200370203.1 | endonuclease/exonuclease/phosphatase family protein | - |
Sequence
Protein
Download Length: 752 a.a. Molecular weight: 83886.27 Da Isoelectric Point: 5.1241
>NTDB_id=518050 JDY60_RS05210 WP_200370200.1 1081970..1084228(+) (clpE) [Streptococcus oralis strain SF100]
MLCQNCKINDSTIHLYTNINGQQKQIDLCQNCYKIIKTDPNNTLFKGMTDLNNHDFDPFGDFFNDLNNFKPSSNNVPPTQ
SGGGYGGNGGYGPQNRGPLQTPPSQEKGLLEEYGINITEIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPGVG
KTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSAGDG
NMDAGNILKPALARGELQMVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETIIILKGVQKKYEDYHHVKYTDAAIEA
AANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAKYKEMQKN
KVTDQDTPIISEKTIEHIIEQKTNIPVGELKEKEQSQLIHLADDLKAHVIGQDEAVDKIAKAIRRNRVGLGTPNRPIGSF
LFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEVEK
AHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGI
IEFKALSKDNLLQIVELMLADVNKRLSSNNIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDYYLENPSEK
TLKAVMTSNGNIQIKSAKKPEKTEEIASEREE
MLCQNCKINDSTIHLYTNINGQQKQIDLCQNCYKIIKTDPNNTLFKGMTDLNNHDFDPFGDFFNDLNNFKPSSNNVPPTQ
SGGGYGGNGGYGPQNRGPLQTPPSQEKGLLEEYGINITEIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPGVG
KTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSAGDG
NMDAGNILKPALARGELQMVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETIIILKGVQKKYEDYHHVKYTDAAIEA
AANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAKYKEMQKN
KVTDQDTPIISEKTIEHIIEQKTNIPVGELKEKEQSQLIHLADDLKAHVIGQDEAVDKIAKAIRRNRVGLGTPNRPIGSF
LFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEVEK
AHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGI
IEFKALSKDNLLQIVELMLADVNKRLSSNNIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDYYLENPSEK
TLKAVMTSNGNIQIKSAKKPEKTEEIASEREE
Nucleotide
Download Length: 2259 bp
>NTDB_id=518050 JDY60_RS05210 WP_200370200.1 1081970..1084228(+) (clpE) [Streptococcus oralis strain SF100]
ATGCTCTGTCAAAACTGTAAAATAAACGACTCAACAATTCATCTGTATACCAATATCAATGGACAGCAAAAGCAAATTGA
TCTCTGTCAAAATTGCTATAAAATTATCAAAACAGATCCAAATAATACCCTCTTTAAAGGAATGACTGACTTAAACAATC
ATGACTTTGATCCTTTCGGCGACTTTTTCAATGATTTGAACAATTTCAAACCTTCTTCAAATAACGTCCCTCCAACTCAA
TCTGGTGGAGGATATGGAGGAAACGGTGGTTATGGACCTCAAAACCGAGGCCCACTTCAAACACCTCCTAGTCAAGAAAA
AGGACTCCTAGAGGAATATGGTATCAATATTACTGAGATTGCTCGTCGGGGAGATATTGACCCCGTTATAGGTCGAGATG
AGGAGATTATCCGCGTTATCGAAATCCTCAACCGTCGAACCAAGAACAACCCTGTCCTTATCGGAGAACCAGGTGTTGGT
AAAACAGCCGTTGTGGAAGGTCTAGCTCAGAAGATTGTCGATGGCGATGTTCCCCATAAACTTCAAGGCAAGCAGGTCAT
CCGTCTGGATGTGGTCAGTCTAGTCCAAGGAACAGGGATTCGAGGCCAATTTGAAGAACGTATGCAAAAGCTCATGGAAG
AAATTCGCAAACGCGAGGACATCATCCTCTTTATCGATGAAATCCATGAAATTGTTGGTGCTGGATCTGCTGGCGATGGC
AATATGGATGCAGGAAATATCCTCAAACCAGCCCTTGCCCGTGGTGAATTACAAATGGTCGGAGCCACTACTCTCAATGA
ATACCGCATCATTGAAAAAGATGCTGCCCTAGAGCGCCGTATGCAGCCTGTCAAGGTAGATGAACCAACTGTCGAAGAGA
CCATTATCATCCTTAAAGGAGTTCAAAAGAAATACGAAGACTACCATCACGTCAAGTATACTGATGCTGCTATCGAAGCT
GCTGCAAATCTTTCCAATCGCTACATCCAAGACCGCTTCTTGCCAGACAAGGCTATTGACCTGTTGGACGAAGCTGGTTC
AAAGATGAATCTGACACTGAACTTTGTTGATCCTAAAGTGATTGATCAGCGTTTAATTGAAGCTGAAAATCTCAAGGCGC
AAGCTACACGAGAGGAAGACTTTGAAAAGGCTGCTTATTTCCGTGATCAGATTGCCAAGTACAAGGAAATGCAGAAAAAC
AAGGTGACCGATCAGGATACTCCAATCATCAGCGAGAAAACCATCGAACATATCATTGAGCAGAAAACCAATATCCCTGT
TGGAGAACTCAAAGAAAAAGAACAGTCTCAGCTTATCCATCTAGCAGACGACCTCAAAGCTCATGTCATTGGTCAAGATG
AAGCTGTCGACAAGATTGCCAAAGCCATCCGTCGTAATCGTGTTGGACTTGGAACTCCTAACCGGCCAATCGGAAGCTTC
CTCTTTGTCGGACCAACTGGTGTCGGTAAGACAGAACTTTCCAAACAACTAGCCATTGAACTTTTTGGTTCAGCAGATAG
CATGATTCGCTTTGATATGAGTGAATACATGGAAAAACACAGTGTGGCTAAATTGGTCGGAGCCCCTCCTGGCTATGTCG
GCTACGATGAAGCTGGTCAATTAACAGAAAAAGTTCGCCGTAATCCCTACTCTCTCATCCTTCTCGATGAAGTAGAAAAA
GCTCATCCTGATGTCATGCACATGTTCCTTCAAGTCTTGGACGATGGTCGTTTGACAGACGGGCAAGGACGGACTGTTAG
CTTTAAGGATGCCATCATTATCATGACTTCAAATGCTGGAACTGGTAAGGCCGAAGCCAGCGTTGGTTTTGGAGCCGCTC
GTGAAGGGCGAACCAACTCTGTCCTTGGTGAACTTGGCAACTTCTTTAGTCCAGAGTTTATGAACCGTTTTGACGGCATC
ATCGAGTTCAAAGCTCTCAGCAAGGACAACCTTCTTCAAATCGTCGAACTCATGCTAGCAGATGTTAACAAACGCCTCTC
TAGCAACAATATCCACCTTGATGTGACAGACAAGGTCAAGGAAAAGTTGGTTGACCTAGGTTATGATCCAAAAATGGGGG
CACGGCCACTCCGTCGTACCATTCAAGACCATATCGAGGATGCTATCACAGACTACTACCTTGAAAATCCAAGTGAGAAA
ACCCTCAAGGCAGTTATGACAAGCAATGGCAATATTCAAATCAAATCTGCCAAAAAACCTGAGAAAACAGAAGAGATCGC
TTCTGAAAGAGAAGAATAA
ATGCTCTGTCAAAACTGTAAAATAAACGACTCAACAATTCATCTGTATACCAATATCAATGGACAGCAAAAGCAAATTGA
TCTCTGTCAAAATTGCTATAAAATTATCAAAACAGATCCAAATAATACCCTCTTTAAAGGAATGACTGACTTAAACAATC
ATGACTTTGATCCTTTCGGCGACTTTTTCAATGATTTGAACAATTTCAAACCTTCTTCAAATAACGTCCCTCCAACTCAA
TCTGGTGGAGGATATGGAGGAAACGGTGGTTATGGACCTCAAAACCGAGGCCCACTTCAAACACCTCCTAGTCAAGAAAA
AGGACTCCTAGAGGAATATGGTATCAATATTACTGAGATTGCTCGTCGGGGAGATATTGACCCCGTTATAGGTCGAGATG
AGGAGATTATCCGCGTTATCGAAATCCTCAACCGTCGAACCAAGAACAACCCTGTCCTTATCGGAGAACCAGGTGTTGGT
AAAACAGCCGTTGTGGAAGGTCTAGCTCAGAAGATTGTCGATGGCGATGTTCCCCATAAACTTCAAGGCAAGCAGGTCAT
CCGTCTGGATGTGGTCAGTCTAGTCCAAGGAACAGGGATTCGAGGCCAATTTGAAGAACGTATGCAAAAGCTCATGGAAG
AAATTCGCAAACGCGAGGACATCATCCTCTTTATCGATGAAATCCATGAAATTGTTGGTGCTGGATCTGCTGGCGATGGC
AATATGGATGCAGGAAATATCCTCAAACCAGCCCTTGCCCGTGGTGAATTACAAATGGTCGGAGCCACTACTCTCAATGA
ATACCGCATCATTGAAAAAGATGCTGCCCTAGAGCGCCGTATGCAGCCTGTCAAGGTAGATGAACCAACTGTCGAAGAGA
CCATTATCATCCTTAAAGGAGTTCAAAAGAAATACGAAGACTACCATCACGTCAAGTATACTGATGCTGCTATCGAAGCT
GCTGCAAATCTTTCCAATCGCTACATCCAAGACCGCTTCTTGCCAGACAAGGCTATTGACCTGTTGGACGAAGCTGGTTC
AAAGATGAATCTGACACTGAACTTTGTTGATCCTAAAGTGATTGATCAGCGTTTAATTGAAGCTGAAAATCTCAAGGCGC
AAGCTACACGAGAGGAAGACTTTGAAAAGGCTGCTTATTTCCGTGATCAGATTGCCAAGTACAAGGAAATGCAGAAAAAC
AAGGTGACCGATCAGGATACTCCAATCATCAGCGAGAAAACCATCGAACATATCATTGAGCAGAAAACCAATATCCCTGT
TGGAGAACTCAAAGAAAAAGAACAGTCTCAGCTTATCCATCTAGCAGACGACCTCAAAGCTCATGTCATTGGTCAAGATG
AAGCTGTCGACAAGATTGCCAAAGCCATCCGTCGTAATCGTGTTGGACTTGGAACTCCTAACCGGCCAATCGGAAGCTTC
CTCTTTGTCGGACCAACTGGTGTCGGTAAGACAGAACTTTCCAAACAACTAGCCATTGAACTTTTTGGTTCAGCAGATAG
CATGATTCGCTTTGATATGAGTGAATACATGGAAAAACACAGTGTGGCTAAATTGGTCGGAGCCCCTCCTGGCTATGTCG
GCTACGATGAAGCTGGTCAATTAACAGAAAAAGTTCGCCGTAATCCCTACTCTCTCATCCTTCTCGATGAAGTAGAAAAA
GCTCATCCTGATGTCATGCACATGTTCCTTCAAGTCTTGGACGATGGTCGTTTGACAGACGGGCAAGGACGGACTGTTAG
CTTTAAGGATGCCATCATTATCATGACTTCAAATGCTGGAACTGGTAAGGCCGAAGCCAGCGTTGGTTTTGGAGCCGCTC
GTGAAGGGCGAACCAACTCTGTCCTTGGTGAACTTGGCAACTTCTTTAGTCCAGAGTTTATGAACCGTTTTGACGGCATC
ATCGAGTTCAAAGCTCTCAGCAAGGACAACCTTCTTCAAATCGTCGAACTCATGCTAGCAGATGTTAACAAACGCCTCTC
TAGCAACAATATCCACCTTGATGTGACAGACAAGGTCAAGGAAAAGTTGGTTGACCTAGGTTATGATCCAAAAATGGGGG
CACGGCCACTCCGTCGTACCATTCAAGACCATATCGAGGATGCTATCACAGACTACTACCTTGAAAATCCAAGTGAGAAA
ACCCTCAAGGCAGTTATGACAAGCAATGGCAATATTCAAATCAAATCTGCCAAAAAACCTGAGAAAACAGAAGAGATCGC
TTCTGAAAGAGAAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus pneumoniae Rx1 |
94.892 |
98.936 |
0.939 |
| clpE | Streptococcus pneumoniae D39 |
94.892 |
98.936 |
0.939 |
| clpE | Streptococcus pneumoniae R6 |
94.892 |
98.936 |
0.939 |
| clpE | Streptococcus pneumoniae TIGR4 |
94.758 |
98.936 |
0.937 |
| clpE | Streptococcus mutans UA159 |
83.156 |
100 |
0.834 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
77.945 |
97.074 |
0.757 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
52.542 |
86.303 |
0.453 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.485 |
83.378 |
0.404 |
| clpC | Streptococcus mutans UA159 |
46.334 |
85.239 |
0.395 |
| clpC | Streptococcus thermophilus LMD-9 |
46.91 |
83.91 |
0.394 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.667 |
83.777 |
0.391 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.182 |
82.58 |
0.39 |
| clpC | Streptococcus pneumoniae Rx1 |
47.182 |
82.58 |
0.39 |
| clpC | Streptococcus pneumoniae D39 |
47.182 |
82.58 |
0.39 |