Detailed information NTG0517893

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KZY07_RS23805
• Genome accession: NZ_CP080155
• Coordinates: 4950195..4951220 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain PK8261
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4945195..4956220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZY07_RS23785 (KZY07_23800)	metJ	4946380..4946697 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KZY07_RS23790 (KZY07_23805)	yiiX	4946757..4947365 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
KZY07_RS23795 (KZY07_23810)	rpmE	4947426..4947638 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KZY07_RS23800 (KZY07_23815)	priA	4947841..4950039 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
KZY07_RS23805 (KZY07_23820)	cytR	4950195..4951220 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KZY07_RS23810 (KZY07_23825)	ftsN	4951312..4952271 (+)	960	WP_000068844.1	cell division protein FtsN	-
KZY07_RS23815 (KZY07_23830)	hslV	4952364..4952894 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KZY07_RS23820 (KZY07_23835)	hslU	4952904..4954235 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KZY07_RS23825 (KZY07_23840)	menA	4954302..4955228 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KZY07_RS23830 (KZY07_23845)	rraA	4955321..4955806 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=517893 KZY07_RS23805 WP_000644904.1 4950195..4951220(+) (cytR) [Escherichia coli strain PK8261]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=517893 KZY07_RS23805 WP_000644904.1 4950195..4951220(+) (cytR) [Escherichia coli strain PK8261]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628