Detailed information NTG0517860

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ITG10_RS04740
• Genome accession: NZ_CP066149
• Coordinates: 1100169..1103558 (+)
• Length: 1129 a.a.
• NCBI ID: WP_017633264.1
• Uniprot ID: -
• Organism: Vibrio sp. ED004
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1095169..1108558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ITG10_RS04720 (ITG10_04655)	erpA	1095457..1095798 (-)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-
ITG10_RS04725 (ITG10_04660)	hemL	1096095..1097390 (+)	1296	WP_017633268.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ITG10_RS26295	-	1097532..1097657 (-)	126	WP_048658168.1	hypothetical protein	-
ITG10_RS04730 (ITG10_04665)	-	1097734..1098819 (+)	1086	WP_017633266.1	AI-2E family transporter	-
ITG10_RS04735 (ITG10_04670)	rsmC	1098930..1099952 (+)	1023	WP_017633265.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ITG10_RS04740 (ITG10_04675)	chiS	1100169..1103558 (+)	3390	WP_017633264.1	response regulator	Regulator
ITG10_RS04745 (ITG10_04680)	-	1104269..1105951 (+)	1683	WP_017633263.1	ABC transporter substrate-binding protein	-
ITG10_RS04750 (ITG10_04685)	-	1106121..1107107 (+)	987	WP_017633262.1	ABC transporter permease	-
ITG10_RS04755 (ITG10_04690)	-	1107110..1108135 (+)	1026	WP_017633261.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127143.80 Da
• Isoelectric Point: 5.3160

>NTDB_id=517860 ITG10_RS04740 WP_017633264.1 1100169..1103558(+) (chiS) [Vibrio sp. ED004]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSYIGSERYRLLHKRYHNAYLELLKRSDF
DDILLVDINGNVAYSVFKNDDYGTNLLTGKYKDSNLGVTFQRLAKDVTDRRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGSDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTLDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVVVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIKSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDAS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATEEELKNYNESGSYSHFQAPDLIDNAQQENSVISENP
DGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCESLRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRINNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDAMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=517860 ITG10_RS04740 WP_017633264.1 1100169..1103558(+) (chiS) [Vibrio sp. ED004]
ATGTTTAGATTTTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGCTGGCATTTCTTGTCCTCAGTATTAC
TCCAGTGACACTTATCGCGATATTTTTCCTTCAATCGCACAGTCAGGATCTTCAGGAACAAAGTACCTCACACCTTGTTT
CAGTCCGTGATACTAAGCAACAGCAAATTGTCGATTACCTGCAAGCTCAAGAATCCCAAGTGATGGGCTTTGTTCGCTCA
GAATTAGCCAATGCCAGTGGCGGTCGATTCTATGGTTTGATCAATGCCTTCCAGCGACTTGGTCTAGATATTGACGAAGC
ACGCAGTAATGCGCAGCAACGCTACATTCAAGGATCGGGCGATCAAATCAAAACATCGATTCTTCCTGAGTCGAGTAGCT
ACATTGGCAGTGAGCGTTATCGCCTACTGCACAAGCGCTACCATAACGCTTACCTAGAGCTGCTTAAACGCTCCGATTTT
GACGATATTCTATTGGTTGATATCAACGGTAACGTTGCTTACTCCGTCTTTAAAAATGACGATTACGGCACTAACTTACT
GACAGGTAAGTATAAAGATTCAAACCTAGGCGTTACCTTTCAACGACTCGCTAAAGATGTCACCGACCGACGTAAATCCA
ATGAAGATTACACACCAGTTATTGTGTCGGACTTTAAAGACGAGAACGGTAAACAGACGGCATGGCTAGGTGCGCCTATC
GTACAGCAGGGCTATCTGCACAGTTATGCGATGTTCAGGCTACCGATCAACGGTATTACCAAGCTTATTGCTGATCTCAA
CAAGAGCTCAAATATTCAAACGCTTCTTGTAGGTAGCGACCACTTACCTCGTAGCCTTGCGCACTCTCAAGAGTCGATTA
ACTTAAGCCTAGACGTGGTTGATAAAGCACTTGCGGGCGAAACAGCCGTAGGCACATTTGATAACACTCTAGATCAGGCG
ATCATCGCGGCCTATACACCAATTGAACTTAAGTACGCGACTTGGGCTCTCGTTGTCGAGCTTCCTGAAAAAGAAGCATT
TGCCCGTATTCATCAACTAGAAAAGATCTTCGTGATCGTGATGCTAACTGCGATCATTCTGGTTGTTGTCGCATCACACT
ATCTCTCTAACTTCATCACCTCACCACTGCTTAAATTGACATGGGCTGCCGAGAAAGTTTCTGCTGGTGATCTTGATGAG
ACAATGATCAACACCGAACGTAAAGATGAAATCGGTCGCTTGGCGGTCAGCTTTGAACGAATGCAACGCTCTATTCGTGA
AAAAATGCAGCTCATCAAGAGCCAAAATGATGAGCTGGAAGACAACCTCAAGACCATTCAAAAACAAAACGAAGAGTTAC
AGCTGGCTAACAAACTCAAAGATGAGTTCTTAGCGACCACCTCTCACGAATTGAGAACACCACTGCATGGCATGGTTGGT
ATTGCTGAAGCACTGATATCTGGCGCGAATGGTCCTATTCCGGCTAACCAGAAGTACCAGTTAGATATCATCATCAATAG
TGGTCAAAGGTTGGCTACACTGGTTGATGACTTGCTTGATTACCACAAGATGCGTTACGGCAGCTTAGATATTAAGAAAT
CTGCGGTTGATCTGTCAGCTGCCACCAGCTTGGTGCTTGAGTTATCTCATCACCTGCTAGGTAACAAACCAATCCGTATT
ATCAACCAAGTTCCAAGCGATCTAGGGCTCGTCTCATCCGATCCTCAACGACTTGAGCAAGTGATGTATAACTTGGTCGG
CAATGCCATCAAGTACACATCCGAAGGTAAGATCGTTATCTCGGCAAGCGTTATCGATGACAACATCCGTGTACAAGTGG
TCGACACTGGCCAAGGCATACCAGCAGAGTACCTTGAGCACATCTTTGAACCGCTGATTCAAGCAGGCCAAGATGCGAGT
AACTATCGCCAAGGTGCGGGGCTTGGGTTATCGATCAGTCGTCAGCTAATCGAGCTAATGGGTGGTTCTCTGTACGTGAG
CAGCCAACCTATGCTTGGCACCACGTTCAGCTTTACTCTGCCTTTGGCGACAGAAGAAGAACTTAAGAACTACAACGAAT
CAGGCAGCTACTCACACTTCCAAGCACCTGATTTGATTGATAACGCGCAGCAAGAGAACAGTGTTATCAGTGAGAACCCT
GATGGCCCACTACTGGTTATCGCTGATGATGAGCCAGTCAACCTACGAGTATTGGACAGCTTCTTGAAATTAGAAGGCTA
TCGAGTACGCACAGCCTGTGACGGACCTGAAACTATTGAATTGATTGAGAAAGAGAAGCCAGAACTACTTCTACTCGACA
TCATGATGCCGGGCATGAGTGGCTATCAAGTGTGTGAATCGCTGCGTAAGCAATATGACCATGCACAGTTGCCAATCATC
ATGCTGACGGCACTCAACCAAGCAGAAGACCGTGTTCGCGGTTTCGAAGCAGGTGCTAATGATTACTTATCTAAGCCGTT
CAACAAACAGGAACTGGCTGCGCGAATCACGGCTCACTTATCAGCAAGTAAAGCCGAACAAAGACGCCTTGAGAATGACC
AATTGCAACTTGAGCTCAAGCACAGAGCCATGGTTGAAGCTAACCTGCTAGAAACTCAAGGACGTTTGCTAGAACAGTTA
GAGTCGGCTCCAGAAGCCATCATCTGTATTCGTGATGATCAGCGTATTCGCTTTGCCAATGAAGCGGCAGCGAAACTGTT
TAGACGTGGACAAGAACAACTTAAGCGCTCCATGGCCGATGAGATCATCGCACCTAAGTACCTTAAGGTGGAACAGGCAC
ACTATTGTGGTGATATCGACATCTATATTGACGATACCCGTCAGCGCATACCAAGTGACATCCTCAAGCTGCCAGAAGGT
TCTGGGCTCGACACCATGTACATCTTCAATGTCGGTGGTGGCGTTAACTCAAACCGTATCAATAACCTTGAGACGGCTGT
TGAAGCACTCTCTAGCTATGCCTTTGAAGGTGATAAGGACAAGCTGCAACAACTCAAGGAGCTCGGTGGTGAATTTACTC
GCCTTGCAGATAAAGCGACTGGAGAAGGGAAAAACAAGCAAGAATTAATGCGTGAAGTCCTAGTGGATGCCATGACTAAT
GCCATCATCTACTGGGAATCGGTGACTGGTGAAACCAAGTTTGCTTTCGCAGAAAAGAGTGGCTTATGGCGCGTCTATTT
AGACCGCAGTACGCTTCAAACGCGAACATTAGATAAATATCTACGCGTAGAAACGCTGCCGAAAACACCTCGCTGGCGAA
CGGTATTGAGCTCTATCGAATTCATACTCGAACACTGTAAAGAGCAGACACCAGAAAGAACACACATTGAGATGCTCAGA
GACAAGCTACAGAAATTACTAACCAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS domain (PAS_8) (880-914)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.882	100	0.769