Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   JC624_RS17470 Genome accession   NZ_CP066124
Coordinates   3632374..3634602 (+) Length   742 a.a.
NCBI ID   WP_017402576.1    Uniprot ID   A0A009H8D5
Organism   Acinetobacter pittii strain 32292     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3627374..3639602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JC624_RS17445 lnt 3627824..3629383 (+) 1560 WP_227062222.1 apolipoprotein N-acyltransferase -
  JC624_RS17450 csaA 3629385..3629723 (-) 339 WP_005079284.1 tRNA-binding protein -
  JC624_RS17455 - 3629869..3630213 (-) 345 WP_227062224.1 hypothetical protein -
  JC624_RS17460 gspG 3630481..3630996 (-) 516 WP_227063893.1 type II secretion system major pseudopilin GspG -
  JC624_RS17465 gspF 3631020..3632225 (-) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  JC624_RS17470 priA 3632374..3634602 (+) 2229 WP_017402576.1 primosomal protein N' Machinery gene
  JC624_RS17475 kefB 3634679..3636523 (+) 1845 WP_032005112.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  JC624_RS17480 hslO 3636687..3637562 (+) 876 WP_017385390.1 Hsp33 family molecular chaperone HslO -
  JC624_RS17485 - 3637700..3638311 (+) 612 WP_002115157.1 LysE family translocator -
  JC624_RS17490 cbpA 3638458..3639414 (+) 957 WP_068565268.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84035.88 Da        Isoelectric Point: 8.6587

>NTDB_id=517590 JC624_RS17470 WP_017402576.1 3632374..3634602(+) (priA) [Acinetobacter pittii strain 32292]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVKLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQSCPVILGSATPSIDSYYLVETGKLTALQLNKRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKHTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGDIVDIWGPIPAPMERKAGRYRAHMVILSTERARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=517590 JC624_RS17470 WP_017402576.1 3632374..3634602(+) (priA) [Acinetobacter pittii strain 32292]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCGTTTGGGCGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTTGATCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GATGAAGAACCAATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCCGCGCAATATTACCAATTTCCAATTGGTGA
GGTCATGCAAACTGCCCTACCCGCGTTATTGCGTCAGGGCAAACCGATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAATTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCGCACGACTTTAGCCCATCGCCTGTTAAATTGGCACAAATGCCGCTCACGCTAAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCTGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAATCACGTTTTAACTGTGATATTGCTCTATTACACTCGGGCTTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCTCAGACGGGCAAAGCATCTATTATTTTAGGAACCCGCTCAGCCATCTATACGCCA
CTGCCACGTTTGGGCTTAATCATTTTAGATGAAGAACATGACCTCTCTTATAAACAGCAAGAAGGCTTCCGCTACCATGC
GCGTGATGTCGCACTGTACCGCGGTCACTTGCAAAGCTGCCCTGTTATTTTAGGTTCAGCAACACCAAGTATTGATAGTT
ATTATTTGGTCGAAACTGGCAAATTAACTGCGCTGCAACTCAACAAACGTGCTGGACATGCACTTTTGCCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATCAGCCAGCCCCTTATTGAACAAATCAAACATACATTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTTTGTGAAAGCTGTGGGTGGCAAGCAA
ATTGTCCGCATTGTGATGCGCATTTTACGTTGCACACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGTACTGTT
CATCGCTTGCCCGATCACTGCCCTGAATGCCAGCAAAAAAGCCTAAAAACCTTAGGTGCTGGAACGGCTAAGGTTGAAGA
GCACTTACAAGAATTATTTCCAGACTATGATGTGATTCGGGTTGATCGTGACAGCACCAGTCGTGTCGGTAGCTGGCAAA
AAATCTATGATCGTATTCATCAAAACAAACCAACAATTTTGCTGGGCACTCAAATGTTGGCTAAAGGCCATCATTTCCCA
CACGTAACTTTGGTTGCTATTTTAGATATTGATGCTGGGTTACTTAGTGTCGATATTCGTGCGCCAGAACGTACTGCGCA
GTTAATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGTGAACACAAAGGCCATGTTTATTTACAGACCTTAAGACCAGATC
ACCCTTTACTCACCACACTCATCGAAAAAGATTATCGGGCGGTTGCCAAACAAACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCGCCTTACCGTTATGCAGTACTGATACGTGCAGAGTCCAAAGATCGCGACTACACCTTACATTTCTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGACATTGTTGATATTTGGGGACCGATTCCAGCCCCTATGGAGCGTAAAGCAG
GACGCTACCGCGCCCACATGGTAATTTTATCTACTGAACGTGCTCGTCTACATTTTTACTTAAGACAATGGTGGTCACAA
TTGGTTCATGCGCCGCGCCAGCATCAACTCAGATTATCAATTGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009H8D5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.844

100

0.978