Detailed information NTG0517536

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: I9190_RS20200
• Genome accession: NZ_CP066121
• Coordinates: 4363484..4364635 (+)
• Length: 383 a.a.
• NCBI ID: WP_004831953.1
• Uniprot ID: A0A0A8TGL6
• Organism: Acinetobacter bereziniae strain GD0320
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4358484..4369635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I9190_RS20175 (I9190_20175)	-	4358541..4359710 (-)	1170	WP_151781268.1	hypothetical protein	-
I9190_RS20180 (I9190_20180)	-	4359806..4360072 (-)	267	WP_151781269.1	DUF4199 domain-containing protein	-
I9190_RS20185 (I9190_20185)	-	4360098..4362176 (-)	2079	WP_151781270.1	TonB-dependent copper receptor	-
I9190_RS20190 (I9190_20190)	-	4362259..4362762 (-)	504	WP_370469256.1	DUF2946 family protein	-
I9190_RS20195 (I9190_20195)	def	4362831..4363361 (-)	531	WP_004831951.1	peptide deformylase	-
I9190_RS20200 (I9190_20200)	tsaP	4363484..4364635 (+)	1152	WP_004831953.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
I9190_RS20205 (I9190_20205)	dprA	4364659..4365786 (+)	1128	WP_198114659.1	DNA-processing protein DprA	Machinery gene
I9190_RS20210 (I9190_20210)	-	4365834..4366403 (+)	570	WP_058968564.1	L-threonylcarbamoyladenylate synthase	-
I9190_RS20215 (I9190_20215)	-	4366834..4367733 (-)	900	WP_004831959.1	DMT family transporter	-
I9190_RS20220 (I9190_20220)	-	4367890..4368534 (-)	645	WP_121775804.1	TetR/AcrR family transcriptional regulator	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 41766.79 Da
• Isoelectric Point: 9.0582

>NTDB_id=517536 I9190_RS20200 WP_004831953.1 4363484..4364635(+) (tsaP) [Acinetobacter bereziniae strain GD0320]
MKKVLTGITGFHAKGFKKQLLAVTLCLSAGFTYMEMTHASPNVNPPALKSSAPNVYVVKRGDTLWDIAGKFLSKPWRWPE
IWASNKHVKNPHWIYPGDKLLLCTLDGRPLIGVDEGDGCDGIIRRHQGGTSLRPQVRVESLNSAISVIPLSDIQPWLEHS
IVISPESLQNIPYTIGAADNRVITGAGQTVYARGNGLVVGQRYGIYREGKPYMFLNAEGKKFNAGLELSEVASAIATAGE
NDVTTLELTKSYNAEVRKGDYVLPSYDAELPSLFYPTTTNEVSTGGKVVRVQGSIGTAAQHSVVTIDRGNLQGAKPGQVF
SIYQQGEVVRDPKTKESVKLPSQQIGTLMIFKSFDHLSYAYILESNLPIKIGAEIKPPAITDQ

Nucleotide

• Length: 1152 bp

>NTDB_id=517536 I9190_RS20200 WP_004831953.1 4363484..4364635(+) (tsaP) [Acinetobacter bereziniae strain GD0320]
ATGAAAAAGGTTTTAACTGGCATAACAGGTTTTCATGCCAAGGGGTTCAAGAAACAGTTACTTGCTGTGACACTATGTTT
AAGTGCAGGATTCACTTACATGGAAATGACACATGCAAGCCCAAATGTTAATCCACCTGCACTCAAATCCAGTGCACCCA
ATGTTTATGTGGTGAAACGTGGTGATACCTTATGGGATATCGCAGGGAAATTTTTAAGTAAGCCGTGGCGTTGGCCTGAA
ATCTGGGCAAGCAATAAACATGTTAAAAATCCACACTGGATTTATCCTGGCGATAAATTACTGTTATGTACTTTAGATGG
TCGTCCATTAATCGGCGTGGATGAAGGTGATGGTTGTGATGGTATTATTCGTCGTCATCAAGGTGGAACATCTTTACGCC
CTCAAGTACGTGTAGAGTCATTAAATAGTGCAATTTCGGTGATTCCTCTATCTGATATTCAACCGTGGCTAGAACACAGC
ATTGTCATCAGTCCTGAGTCTTTACAAAATATTCCTTATACCATTGGTGCTGCTGATAATCGTGTGATTACGGGCGCTGG
TCAAACCGTATATGCACGCGGAAATGGCTTAGTGGTAGGTCAGCGTTATGGCATTTACCGCGAAGGTAAACCTTATATGT
TCCTCAATGCGGAAGGTAAAAAGTTTAATGCGGGACTGGAGTTATCTGAAGTTGCTTCAGCAATCGCAACGGCAGGTGAA
AATGATGTCACTACACTTGAATTGACCAAGAGCTACAATGCAGAAGTTCGTAAAGGTGATTATGTTCTTCCTAGCTATGA
TGCAGAACTACCGAGCTTGTTCTATCCAACCACCACTAATGAAGTGAGTACTGGTGGTAAAGTGGTGCGTGTCCAAGGTT
CGATTGGTACAGCAGCACAACACAGTGTAGTCACTATTGATCGCGGTAACTTACAAGGTGCGAAACCTGGACAAGTATTT
AGTATTTATCAACAAGGTGAAGTTGTTCGTGATCCAAAAACCAAGGAATCGGTAAAATTACCAAGTCAGCAAATTGGTAC
ACTGATGATTTTTAAAAGCTTTGATCATCTGAGTTATGCTTATATTTTAGAAAGCAACTTACCGATTAAAATAGGTGCTG
AGATCAAACCACCTGCGATTACAGATCAGTGA

Domains

Predicted by InterproScan.

• LysM domain (LysM) (56-101)

3D structure

• AlphaFold DB: A0A0A8TGL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	63.021	100	0.632