Detailed information NTG0517486

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I9192_RS10045
• Genome accession: NZ_CP066119
• Coordinates: 2166005..2166658 (+)
• Length: 217 a.a.
• NCBI ID: WP_005029252.1
• Uniprot ID: N9F8A0
• Organism: Acinetobacter bereziniae strain GD03185
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2161005..2171658

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I9192_RS10010 (I9192_10010)	kdsB	2161413..2162174 (+)	762	WP_005029263.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
I9192_RS10015 (I9192_10015)	-	2162212..2163192 (+)	981	WP_005029261.1	DNA polymerase III, delta' subunit	-
I9192_RS10020 (I9192_10020)	-	2163219..2163560 (+)	342	WP_004830992.1	PilZ domain-containing protein	-
I9192_RS10025 (I9192_10025)	-	2163588..2164361 (+)	774	WP_005029259.1	TatD family hydrolase	-
I9192_RS10030 (I9192_10030)	-	2164446..2165060 (+)	615	WP_005029256.1	TetR/AcrR family transcriptional regulator	-
I9192_RS10035 (I9192_10035)	-	2165066..2165632 (+)	567	WP_005029254.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
I9192_RS10040 (I9192_10040)	xcpV	2165619..2166002 (+)	384	WP_004830987.1	type II secretion system minor pseudopilin GspI	Machinery gene
I9192_RS10045 (I9192_10045)	xcpW	2166005..2166658 (+)	654	WP_005029252.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I9192_RS10050 (I9192_10050)	gspK	2166651..2167622 (+)	972	WP_004830985.1	type II secretion system minor pseudopilin GspK	-
I9192_RS10055 (I9192_10055)	-	2167848..2168444 (+)	597	WP_005029250.1	6-carboxytetrahydropterin synthase	-
I9192_RS10060 (I9192_10060)	ung	2168519..2169232 (+)	714	WP_004830983.1	uracil-DNA glycosylase	-
I9192_RS10065 (I9192_10065)	-	2169229..2170350 (+)	1122	WP_004830982.1	enoyl-CoA hydratase/isomerase family protein	-
I9192_RS10070 (I9192_10070)	tadA	2170357..2170881 (+)	525	WP_005029246.1	tRNA adenosine(34) deaminase TadA	-
I9192_RS10075 (I9192_10075)	-	2170968..2171402 (+)	435	WP_004830980.1	SRPBCC family protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 25078.60 Da
• Isoelectric Point: 8.2714

>NTDB_id=517486 I9192_RS10045 WP_005029252.1 2166005..2166658(+) (xcpW) [Acinetobacter bereziniae strain GD03185]
MNVVQNKNNNTVKMQKRSGFTLIELLVAIAIFAVLSALGWKIFDYLIKVKDRNVMHEENLGQLQGAYQQIQRDTLQIVPI
SARSGEQVEPALRLDRQKLSFSKAGVTDPLKQGLSPYERIEYGYDQQEKKLYRLKYSNLNRNSSEQPLSSVMLTDVDAYQ
IEILNPNESDRWPNDLTKNDSQLPRGIKMKITIHEVEYEWIFSLLNTDFLIKNNQNG

Nucleotide

• Length: 654 bp

>NTDB_id=517486 I9192_RS10045 WP_005029252.1 2166005..2166658(+) (xcpW) [Acinetobacter bereziniae strain GD03185]
ATGAACGTCGTCCAAAATAAAAACAATAATACTGTCAAAATGCAGAAAAGATCAGGTTTTACTTTGATTGAGCTACTTGT
CGCAATTGCTATTTTTGCTGTGCTTTCTGCCTTGGGTTGGAAAATATTTGATTATTTGATTAAGGTCAAAGATCGTAATG
TGATGCACGAAGAGAATTTAGGGCAACTCCAAGGTGCATATCAACAAATTCAGCGTGATACATTGCAAATCGTGCCAATT
TCAGCCCGAAGTGGTGAACAAGTTGAACCTGCATTGCGCTTAGATCGACAAAAACTATCATTTAGTAAAGCTGGTGTTAC
AGATCCTTTAAAGCAAGGTCTCTCACCTTATGAGCGAATAGAATACGGTTATGACCAGCAAGAGAAGAAACTATATCGAT
TAAAGTATTCCAATCTGAATCGAAATAGCTCGGAACAACCATTGTCGAGTGTCATGCTGACGGATGTAGATGCCTATCAA
ATTGAAATACTCAATCCAAATGAGTCAGATCGTTGGCCAAATGACTTAACTAAAAATGATAGCCAATTACCGCGTGGAAT
TAAAATGAAAATCACGATTCATGAAGTAGAATATGAGTGGATTTTTAGTTTATTGAATACTGATTTTTTGATAAAGAATA
ATCAAAATGGATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (70-201)

• Prokaryotic N-terminal methylation motif (N_methyl) (14-38)

3D structure

• AlphaFold DB: N9F8A0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	59.813	98.618	0.59