Detailed information NTG0517404

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KZX72_RS24520
• Genome accession: NZ_CP080120
• Coordinates: 5059833..5060858 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain M24
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5054833..5065858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZX72_RS24500 (KZX72_24500)	metJ	5056018..5056335 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KZX72_RS24505 (KZX72_24505)	yiiX	5056395..5057003 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
KZX72_RS24510 (KZX72_24510)	rpmE	5057064..5057276 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KZX72_RS24515 (KZX72_24515)	priA	5057479..5059677 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
KZX72_RS24520 (KZX72_24520)	cytR	5059833..5060858 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
KZX72_RS24525 (KZX72_24525)	ftsN	5060950..5061909 (+)	960	WP_000068834.1	cell division protein FtsN	-
KZX72_RS24530 (KZX72_24530)	hslV	5062002..5062532 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KZX72_RS24535 (KZX72_24535)	hslU	5062542..5063873 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KZX72_RS24540 (KZX72_24540)	menA	5063940..5064866 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KZX72_RS24545 (KZX72_24545)	rraA	5064959..5065444 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KZX72_RS24550 (KZX72_24550)	zapB	5065529..5065774 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=517404 KZX72_RS24520 WP_000644908.1 5059833..5060858(+) (cytR) [Escherichia coli strain M24]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=517404 KZX72_RS24520 WP_000644908.1 5059833..5060858(+) (cytR) [Escherichia coli strain M24]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625