Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   I6I02_RS01185 Genome accession   NZ_CP066093
Coordinates   239213..240289 (+) Length   358 a.a.
NCBI ID   WP_198463647.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 234213..245289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS01155 (I6I02_01155) - 235107..235853 (+) 747 WP_095559509.1 amino acid ABC transporter permease -
  I6I02_RS01160 (I6I02_01160) - 235853..236596 (+) 744 WP_002891704.1 amino acid ABC transporter ATP-binding protein -
  I6I02_RS01165 (I6I02_01165) - 236808..237032 (+) 225 WP_002884393.1 DUF4059 family protein -
  I6I02_RS01170 (I6I02_01170) trxB 237098..238018 (+) 921 WP_198463645.1 thioredoxin-disulfide reductase -
  I6I02_RS01175 (I6I02_01175) rsmD 238157..238705 (+) 549 WP_232621286.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I6I02_RS01180 (I6I02_01180) coaD 238738..239235 (+) 498 WP_198463646.1 pantetheine-phosphate adenylyltransferase -
  I6I02_RS01185 (I6I02_01185) sepM 239213..240289 (+) 1077 WP_198463647.1 SepM family pheromone-processing serine protease Regulator
  I6I02_RS01190 (I6I02_01190) - 240375..241319 (+) 945 WP_198463648.1 TIGR01212 family radical SAM protein -
  I6I02_RS01195 (I6I02_01195) - 241316..241864 (+) 549 WP_198463649.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  I6I02_RS01200 (I6I02_01200) - 241861..242103 (+) 243 WP_002891697.1 hypothetical protein -
  I6I02_RS01205 (I6I02_01205) - 242112..244178 (+) 2067 WP_155213416.1 cation:proton antiporter -
  I6I02_RS01210 (I6I02_01210) - 244211..244531 (-) 321 WP_175057283.1 hypothetical protein -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39062.81 Da        Isoelectric Point: 9.2472

>NTDB_id=517338 I6I02_RS01185 WP_198463647.1 239213..240289(+) (sepM) [Streptococcus salivarius strain FDAARGOS_1045]
MANKNESKSLLGKIWRIKWWLLSIFTVLFILFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDLIKYVQGLKLGSKVKVTYMTEDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=517338 I6I02_RS01185 WP_198463647.1 239213..240289(+) (sepM) [Streptococcus salivarius strain FDAARGOS_1045]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGTATTAAGTGGTGGTTGCTAAGTATTTTTACGGT
ACTGTTCATCCTGTTTGCTCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACTAAGG
AAGTCTTGACTGTAGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCAGTGGCTCAAACTAAGGCGACT
TTGGCCCTCATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGTATCAATCAATTCTACATGGAGACTTCCCAAAACCAGGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGCTTCAGGTGGCTGATGATTCTAGTTTCAAGGGTGTCCTTAAT
ATTGCGGATACAGTGACAGCTGTCAATGGCAAGACCTTTGACAATTCTACTGACTTGATTAAATACGTCCAAGGACTTAA
GTTGGGTTCAAAAGTCAAGGTCACTTATATGACAGAGGACAAAGAAAAGACTGCCACTGGTAAGATCATTAAGATTGCTA
ATGGTAAAAATGGTATCGGTATTGGTTTGACGGATCATACTGAGGTCAAGAGTCCTGAAAACGTGAAGTTTAAACTTGAT
GGTGTTGGTGGACCAAGTGCGGGGCTTATGTTTACTTTGGCTATCTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGTAAAATTGCTGGAACAGGAACCATTGAAAAGGATGGTTCTGTCGGTGATATCGGTGGTGCCTACCTCAAGGTGAAAT
CGGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCCAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGAACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAGTAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.103

95.251

0.62