Detailed information NTG0517282

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KZX76_RS07895
• Genome accession: NZ_CP080119
• Coordinates: 1632678..1633703 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain M45
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1627678..1638703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZX76_RS07865 (KZX76_07865)	zapB	1627762..1628007 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
KZX76_RS07870 (KZX76_07870)	rraA	1628092..1628577 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KZX76_RS07875 (KZX76_07875)	menA	1628670..1629596 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KZX76_RS07880 (KZX76_07880)	hslU	1629663..1630994 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KZX76_RS07885 (KZX76_07885)	hslV	1631004..1631534 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KZX76_RS07890 (KZX76_07890)	ftsN	1631627..1632586 (-)	960	WP_000068834.1	cell division protein FtsN	-
KZX76_RS07895 (KZX76_07895)	cytR	1632678..1633703 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
KZX76_RS07900 (KZX76_07900)	priA	1633859..1636057 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
KZX76_RS07905 (KZX76_07905)	rpmE	1636260..1636472 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
KZX76_RS07910 (KZX76_07910)	yiiX	1636533..1637141 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
KZX76_RS07915 (KZX76_07915)	metJ	1637201..1637518 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=517282 KZX76_RS07895 WP_000644908.1 1632678..1633703(-) (cytR) [Escherichia coli strain M45]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=517282 KZX76_RS07895 WP_000644908.1 1632678..1633703(-) (cytR) [Escherichia coli strain M45]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625