Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   I6H73_RS10205 Genome accession   NZ_CP066073
Coordinates   2046877..2047590 (+) Length   237 a.a.
NCBI ID   WP_003058742.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1016     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2041877..2052590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H73_RS10195 (I6H73_10195) treC 2042947..2044575 (-) 1629 WP_003058763.1 alpha,alpha-phosphotrehalase -
  I6H73_RS10200 (I6H73_10200) treP 2044642..2046666 (-) 2025 WP_003058731.1 PTS system trehalose-specific EIIBC component -
  I6H73_RS10205 (I6H73_10205) treR 2046877..2047590 (+) 714 WP_003058742.1 trehalose operon repressor Regulator
  I6H73_RS10210 (I6H73_10210) - 2047872..2048210 (-) 339 WP_003058780.1 helix-turn-helix domain-containing protein -
  I6H73_RS10215 (I6H73_10215) - 2048406..2049263 (+) 858 WP_003058766.1 VOC family protein -
  I6H73_RS10220 (I6H73_10220) yaaA 2049305..2050036 (+) 732 WP_003058734.1 peroxide stress protein YaaA -
  I6H73_RS10225 (I6H73_10225) nrdG 2050209..2050823 (-) 615 WP_003058750.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  I6H73_RS10230 (I6H73_10230) - 2050827..2051330 (-) 504 WP_003058815.1 GNAT family N-acetyltransferase -
  I6H73_RS10235 (I6H73_10235) - 2051339..2052274 (-) 936 WP_003058797.1 Gfo/Idh/MocA family oxidoreductase -
  I6H73_RS10240 (I6H73_10240) - 2052303..2052449 (-) 147 WP_003053094.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27606.81 Da        Isoelectric Point: 9.6226

>NTDB_id=517202 I6H73_RS10205 WP_003058742.1 2046877..2047590(+) (treR) [Streptococcus dysgalactiae strain FDAARGOS_1016]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASILDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=517202 I6H73_RS10205 WP_003058742.1 2046877..2047590(+) (treR) [Streptococcus dysgalactiae strain FDAARGOS_1016]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCATCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

69.231

98.734

0.684