Detailed information NTG0517145

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KZX74_RS23135
• Genome accession: NZ_CP080117
• Coordinates: 4771151..4772176 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain OV24
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4766151..4777176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZX74_RS23115 (KZX74_23120)	metJ	4767336..4767653 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KZX74_RS23120 (KZX74_23125)	yiiX	4767713..4768321 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
KZX74_RS23125 (KZX74_23130)	rpmE	4768382..4768594 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KZX74_RS23130 (KZX74_23135)	priA	4768797..4770995 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
KZX74_RS23135 (KZX74_23140)	cytR	4771151..4772176 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
KZX74_RS23140 (KZX74_23145)	ftsN	4772268..4773227 (+)	960	WP_000068834.1	cell division protein FtsN	-
KZX74_RS23145 (KZX74_23150)	hslV	4773320..4773850 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KZX74_RS23150 (KZX74_23155)	hslU	4773860..4775191 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KZX74_RS23155 (KZX74_23160)	menA	4775258..4776184 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KZX74_RS23160 (KZX74_23165)	rraA	4776277..4776762 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KZX74_RS23165 (KZX74_23170)	zapB	4776847..4777092 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=517145 KZX74_RS23135 WP_000644908.1 4771151..4772176(+) (cytR) [Escherichia coli strain OV24]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=517145 KZX74_RS23135 WP_000644908.1 4771151..4772176(+) (cytR) [Escherichia coli strain OV24]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625