Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   I6H74_RS04635 Genome accession   NZ_CP066069
Coordinates   935576..936613 (+) Length   345 a.a.
NCBI ID   WP_015057897.1    Uniprot ID   A0A9X9R3T4
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 930576..941613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS04615 (I6H74_04610) arcC 932107..933057 (+) 951 WP_012767309.1 carbamate kinase -
  I6H74_RS04620 (I6H74_04615) asnA 933383..934375 (+) 993 WP_003055679.1 aspartate--ammonia ligase -
  I6H74_RS04625 (I6H74_04620) rsmD 934569..935108 (+) 540 WP_041781651.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I6H74_RS04630 (I6H74_04625) coaD 935098..935589 (+) 492 WP_003051905.1 pantetheine-phosphate adenylyltransferase -
  I6H74_RS04635 (I6H74_04630) sepM 935576..936613 (+) 1038 WP_015057897.1 SepM family pheromone-processing serine protease Regulator
  I6H74_RS04640 (I6H74_04635) - 936894..937877 (+) 984 WP_003053684.1 LacI family DNA-binding transcriptional regulator -
  I6H74_RS04645 (I6H74_04640) rbsK 937870..938781 (+) 912 WP_003061715.1 ribokinase -
  I6H74_RS04650 (I6H74_04645) rbsD 938756..939154 (+) 399 WP_003061114.1 D-ribose pyranase -
  I6H74_RS04655 (I6H74_04650) - 939170..940648 (+) 1479 WP_046177543.1 sugar ABC transporter ATP-binding protein -
  I6H74_RS04660 (I6H74_04655) rbsC 940650..941591 (+) 942 WP_115256968.1 ribose ABC transporter permease -

Sequence

Protein


Download         Length: 345 a.a.        Molecular weight: 37589.15 Da        Isoelectric Point: 9.4270

>NTDB_id=517101 I6H74_RS04635 WP_015057897.1 935576..936613(+) (sepM) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MKTIKKIKWWLISLIALVALLIVLFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDISKDSTFKGTLNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSADKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKDGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=517101 I6H74_RS04635 WP_015057897.1 935576..936613(+) (sepM) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAGTCTAATTGCCCTCGTGGCTCTGCTTATCGTCCTTTTTTTCCC
TCTTCCTTATTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGATACCACAGGCGGTTATAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTAT
ATGTGTTAGATATTAGCAAGGATTCAACCTTTAAAGGTACTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGACAAAATCGAGTTTAGTACCCAAGGTGTTGGGGGTCCTAGCGCAGGCTTAATGTTT
ACATTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACCATTGGTAA
AGATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(130-192)

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(233-299)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.884

100

0.719