Detailed information NTG0517032

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KZX73_RS12695
• Genome accession: NZ_CP080116
• Coordinates: 2594307..2595290 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain Dog168
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2589307..2600290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZX73_RS12680 (KZX73_12685)	dppA	2590451..2592058 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
KZX73_RS12685 (KZX73_12690)	dppB	2592365..2593384 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
KZX73_RS12690 (KZX73_12695)	dppC	2593394..2594296 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KZX73_RS12695 (KZX73_12700)	amiE	2594307..2595290 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
KZX73_RS12700 (KZX73_12705)	dppF	2595287..2596291 (+)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KZX73_RS12705 (KZX73_12710)	yhjV	2596321..2597592 (-)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
KZX73_RS12710 (KZX73_12715)	-	2598068..2598175 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KZX73_RS12715 (KZX73_12720)	-	2598551..2598658 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
KZX73_RS12720 (KZX73_12725)	-	2599034..2599141 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=517032 KZX73_RS12695 WP_001196477.1 2594307..2595290(+) (amiE) [Escherichia coli strain Dog168]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=517032 KZX73_RS12695 WP_001196477.1 2594307..2595290(+) (amiE) [Escherichia coli strain Dog168]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404