Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   I6H78_RS06925 Genome accession   NZ_CP066059
Coordinates   1432011..1432724 (-) Length   237 a.a.
NCBI ID   WP_198459217.1    Uniprot ID   A0A7T4IRV9
Organism   Streptococcus oralis strain FDAARGOS_1021     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1427011..1437724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H78_RS06925 (I6H78_06925) treR 1432011..1432724 (-) 714 WP_198459217.1 trehalose operon repressor Regulator
  I6H78_RS06930 (I6H78_06930) treP 1432909..1434876 (+) 1968 WP_198459218.1 PTS system trehalose-specific EIIBC component -
  I6H78_RS06935 (I6H78_06935) treC 1434940..1436565 (+) 1626 WP_198459219.1 alpha,alpha-phosphotrehalase -
  I6H78_RS06940 (I6H78_06940) - 1436824..1437069 (+) 246 WP_000364986.1 YneF family protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27744.84 Da        Isoelectric Point: 8.3028

>NTDB_id=516985 I6H78_RS06925 WP_198459217.1 1432011..1432724(-) (treR) [Streptococcus oralis strain FDAARGOS_1021]
MKKYQQLFKQIQKTIQNETYAVGDFLPSEHELMNQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVQELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELVPNLTRQIAEQSIY
SYIENDLKLHIDYAQKEITIDHTGDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFHFVDFAKRHPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=516985 I6H78_RS06925 WP_198459217.1 1432011..1432724(-) (treR) [Streptococcus oralis strain FDAARGOS_1021]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAAAAACCATTCAAAACGAGACATACGCTGTCGGGGATTTCCTCCC
CAGCGAGCACGAACTCATGAATCAGTATCAGGTGAGCCGTGACACCGTCCGAAAAGCTCTGTCCCTTCTCCAAGAAGAAG
GATTAATCAAAAAGATAAGGGGACAAGGTTCTCAAGTCGTCAAAGAAGAAACGGTCAATTTCCCTGTCTCCAACCTAACC
AGCTACCAAGAACTGGTCCAGGAACTTGGACTTCGCTCTAAGACTAATGTGGTCAGTCTGGATAAAATCATTATCGATAA
AAAATCCTCACTGATAACCGGCTTTCCAGAGTTTCGGATGGTGTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGACCTAG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTGGTCCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAC
TCGTATATAGAGAACGACCTCAAACTCCATATTGATTATGCTCAGAAGGAAATCACCATTGACCACACGGGTGATCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCAATCAAGTCAAAAGTCTATCTCCAAGACGGGCGCCAAT
TTCAGTTCACCGAAAGTCGCCATAAATTAGAAAAATTTCACTTTGTCGACTTTGCCAAAAGACATCCGAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(89-226)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T4IRV9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

58.298

99.156

0.578