Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6H78_RS06660 Genome accession   NZ_CP066059
Coordinates   1364675..1366435 (+) Length   586 a.a.
NCBI ID   WP_198459187.1    Uniprot ID   A0A7T4M044
Organism   Streptococcus oralis strain FDAARGOS_1021     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1359675..1371435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H78_RS06640 (I6H78_06640) - 1360807..1361523 (+) 717 WP_049524687.1 YebC/PmpR family DNA-binding transcriptional regulator -
  I6H78_RS06645 (I6H78_06645) - 1361573..1362277 (-) 705 WP_198459184.1 CD20-like domain-containing protein -
  I6H78_RS06650 (I6H78_06650) - 1362471..1362932 (+) 462 WP_198459185.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6H78_RS06655 (I6H78_06655) rcrP 1362916..1364685 (+) 1770 WP_198459186.1 ABC transporter ATP-binding protein Regulator
  I6H78_RS06660 (I6H78_06660) rcrQ 1364675..1366435 (+) 1761 WP_198459187.1 ABC transporter ATP-binding protein Regulator
  I6H78_RS06665 (I6H78_06665) - 1366532..1367035 (+) 504 WP_198459188.1 phosphatase PAP2 family protein -
  I6H78_RS06670 (I6H78_06670) - 1367149..1367595 (+) 447 WP_198459189.1 LytTR family DNA-binding domain-containing protein -
  I6H78_RS06675 (I6H78_06675) - 1367602..1368276 (+) 675 WP_198459190.1 LiaF transmembrane domain-containing protein -
  I6H78_RS06680 (I6H78_06680) rpmB 1368381..1368569 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  I6H78_RS06685 (I6H78_06685) - 1368828..1369193 (+) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -
  I6H78_RS06690 (I6H78_06690) - 1369196..1370863 (+) 1668 WP_198459191.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64640.33 Da        Isoelectric Point: 5.0388

>NTDB_id=516984 I6H78_RS06660 WP_198459187.1 1364675..1366435(+) (rcrQ) [Streptococcus oralis strain FDAARGOS_1021]
MENKKVSVWKQCKPYMAGLQLPILIAVVAAVISSIITVYGPTKIKEITNLISDGLATEIDLVVVSNIASFLVILYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFEAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHISIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKERQLAHMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYELDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTDISDERMMEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=516984 I6H78_RS06660 WP_198459187.1 1364675..1366435(+) (rcrQ) [Streptococcus oralis strain FDAARGOS_1021]
ATGGAAAATAAAAAAGTGTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTCCCTATCCTAATAGCAGT
TGTGGCTGCAGTCATTTCAAGTATCATTACCGTTTATGGTCCAACTAAGATTAAAGAAATTACTAACTTGATTTCAGATG
GTTTGGCTACAGAAATCGACTTGGTAGTTGTGTCAAACATTGCTAGCTTTTTAGTGATTCTCTATGTATTTGGCGCCATT
CTTAACTATACACAGGCCTATATCTTTTCAACGAGTATCCAACATTTTTCAAAACGCTTGCGGACGGCTATCGCTGAAAA
GATTAATCGTTTGCCACTTGGCTATTTTGACCGTCATTCACAAGGAGATACCCTTTCGCGCGTGACCAATGATGTGGATA
CGGCAGCGCAATCTCTCAACCAAAGTTTAGGGACAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGGGATGAACTGGATTTTGGCTCTCGTAACAGTGGTCTCTACGCTTGTTGGTTTTGCAGCGGTTTCCGTAATCATGGC
CAAGTCACAAGGATACTTTGAGGCCCAACAAAATAATCTGGCAGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGAC
ACAATGTTGTGACCAGCTACAACGCAGTAGACACCTCCAAAGCGAGATTCGCAGGTTTAAACCAAGACTTGCATGATAGT
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGGAACTTTAGTTATGTCTTAGTCAT
CATCGTTGGGGCCGCGCTGGCGTTAGAAGGACATATCAGTATCGGGATTATCGTCGCCTTTATGGTTTACGTACGGACCT
TCTCACAACCTCTGTCACAGATTGCCCAAGGTATTACGAGTTTGCAACAAGCAAGCGCAGCCATGACTCGTGTATTAGAA
TTTCTAGCTGAAGCAGAGATGCAGGATGAATCTCATAAGGAAAGACAATTGGCCCATATGAAAGGGGAAGTAGTCTTTGA
TCACGTGTCCTTTGGCTATACACCAGAGCGCACCATCATCCATGACTTTTCTGCGACAGCTCATGCAGGTCAGAAAGTCG
CGATTGTTGGACCGACTGGGGCTGGGAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGCTAGATAAGGGAAGT
ATCCGCATAGATGGTGTGGATACCAAGGATATGAAGCGCTCAGAAGTACATGATGCCTTTTCAATGGTTTTGCAGGACAC
TTGGCTCTTTGAAGGAACGATTCGAGAGAACCTGATCTATAATCAGACAGACATCAGTGATGAACGAATGATGGAAGCCA
GCAAGGCTGTGGGAATCCACCACTTTATCATGACTTTGCCAGATGGCTACGATACTGTTTTGGATGACACCGTGACCTTG
TCTGTTGGACAGAAACAGCTCTTGACCATTGCTCGTGCTTTGCTGAAAGATGCACCGCTCTTGATTTTGGATGAAGCAAC
ATCCTCAGTCGACACACGTACAGAGGAGTTGATTCAAAAAGCCATGGACCGTTTGATGGAGGGTAGAACTTCCTTTGTCA
TCGCCCACCGCTTGTCAACTATCCGTAATGCCGACTTGATTCTTGTCATGAAAGATGGCAATATCATCGAACAAGGCAAT
CATGAGGAACTAATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T4M044

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.61

99.659

0.664