Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6H78_RS06655 Genome accession   NZ_CP066059
Coordinates   1362916..1364685 (+) Length   589 a.a.
NCBI ID   WP_198459186.1    Uniprot ID   A0A7T4M1T3
Organism   Streptococcus oralis strain FDAARGOS_1021     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1357916..1369685
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H78_RS06625 (I6H78_06625) - 1358350..1358544 (+) 195 WP_198459181.1 PspC domain-containing protein -
  I6H78_RS06630 (I6H78_06630) - 1358676..1359230 (-) 555 WP_198459182.1 GNAT family N-acetyltransferase -
  I6H78_RS06635 (I6H78_06635) - 1359340..1360710 (+) 1371 WP_198459183.1 MATE family efflux transporter -
  I6H78_RS06640 (I6H78_06640) - 1360807..1361523 (+) 717 WP_049524687.1 YebC/PmpR family DNA-binding transcriptional regulator -
  I6H78_RS06645 (I6H78_06645) - 1361573..1362277 (-) 705 WP_198459184.1 CD20-like domain-containing protein -
  I6H78_RS06650 (I6H78_06650) - 1362471..1362932 (+) 462 WP_198459185.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6H78_RS06655 (I6H78_06655) rcrP 1362916..1364685 (+) 1770 WP_198459186.1 ABC transporter ATP-binding protein Regulator
  I6H78_RS06660 (I6H78_06660) rcrQ 1364675..1366435 (+) 1761 WP_198459187.1 ABC transporter ATP-binding protein Regulator
  I6H78_RS06665 (I6H78_06665) - 1366532..1367035 (+) 504 WP_198459188.1 phosphatase PAP2 family protein -
  I6H78_RS06670 (I6H78_06670) - 1367149..1367595 (+) 447 WP_198459189.1 LytTR family DNA-binding domain-containing protein -
  I6H78_RS06675 (I6H78_06675) - 1367602..1368276 (+) 675 WP_198459190.1 LiaF transmembrane domain-containing protein -
  I6H78_RS06680 (I6H78_06680) rpmB 1368381..1368569 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  I6H78_RS06685 (I6H78_06685) - 1368828..1369193 (+) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65363.79 Da        Isoelectric Point: 6.6278

>NTDB_id=516983 I6H78_RS06655 WP_198459186.1 1362916..1364685(+) (rcrP) [Streptococcus oralis strain FDAARGOS_1021]
MKKLAKRITGKEWGMILLTILFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPAAKMIGLSLLAFFSSVMVGFFAA
RVAASYTTHLRRDVFHQVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDKKFEAANDEVTRLNLFVNRLMAI
MNPIMMAISSGLSLAIYWIGAYIINDASVTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSHAQTADPSVQGQVEFRDVTFRYSKNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGQILV
DGVNVQDYDLEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSKETPLSEAAMWQALELAQSKAFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=516983 I6H78_RS06655 WP_198459186.1 1362916..1364685(+) (rcrP) [Streptococcus oralis strain FDAARGOS_1021]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGGATGATTCTCCTTACGATTCTGTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAGGTGCCGACTTATATTTCGCAAATTACAGAATTACTGGGAACGTCTGGAACGCAGTTGGGTGAAC
TCTGGTCACCAGCTGCGAAGATGATTGGTTTGTCTTTATTGGCTTTCTTTTCATCTGTTATGGTTGGTTTCTTTGCTGCT
CGCGTTGCAGCATCTTATACAACCCATCTACGTAGAGATGTTTTTCATCAGGTTTTGGATTTTTCACAGACAGAAATCAA
GCGCTTTTCAATCCCAAGTCTTTTGACTCGGACGACCAATGATATTACCCAGGTACAGATGCTCTTTACCATGGGCTTGC
AAGTGGTTACTCGTGGGCCGATTATGGCTATCTGGGCCATTGGGAAAATCCTTGGGAAATCGGAATATTGGCTCTGGGCG
GTCGTTGTGGCTGTTATTGTCAATGTCTTGATGACCACTGTTCTCATGACTCTGGCCTTTCCAAAACAATCGGTCATCCA
AAAATTGACAGATAAACTCAATAGTATCACTCGTGAAAGTTTGACTGGGATTCGAGTTGTACGCGCATACAATGCCGAGG
ATTACCAAGATAAGAAATTTGAAGCAGCCAACGATGAGGTAACACGTCTCAATCTCTTTGTCAATCGTTTGATGGCCATT
ATGAATCCCATTATGATGGCGATTTCTAGTGGCTTGAGTCTAGCCATTTACTGGATCGGTGCCTATATCATCAACGACGC
AAGTGTGACAGAACGTCTACCACTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTCGTGATGGGCTTCC
TTCTCATGGGAGCACTTTTTATCGTTCTTCCTCGTACCTTGGTTTCGGCAGGACGTATCAATCAAGTATTGGATCTGCAT
TCTTCTATTGAAAATCCTAGTCACGCTCAGACAGCGGATCCTTCAGTTCAAGGACAAGTGGAATTCCGTGATGTGACTTT
CCGTTACTCTAAAAACTCAGAAGCAGTCGTGGAACATGTCACTTTCAAAGCAGAAGCGGGTCAAACCGTAGCCTTCATCG
GATCGACTGGATCAGGTAAGTCTACGCTTGTCAACCTCTTGCCACGTTTTTACGACGTTTCAGATGGACAAATCCTAGTG
GATGGTGTCAATGTGCAAGATTATGACTTGGAAGATTTGCGCAATAAGGTCGGCTATATTCCACAAAAAGCTGTACTCTT
TTCCGGAGATGTCAAGGGGAACTTGGACTTTGGTAAGAGCAAAGAAACTCCTCTAAGCGAAGCTGCTATGTGGCAAGCCC
TTGAATTGGCCCAGTCTAAAGCATTTATCGAGGACAAGGAAGCAGGTCTTGCATCAGAAGTAGCCCAAGGTGGAACCAAC
TTCTCAGGAGGACAAAGACAGCGTCTGGCCATTGCGCGTGCCTTGGCTCGTAAACCAGAGATTCTCATCTTTGATGATTC
CTTCTCAGCCTTGGACTACAAGACAGATCGTGTCCTACGCCAAGAGCTAGCCGAGAAAACAAAATCCATGACCAAGCTCA
TCGTAGCGCAGCGCATTTCTACCATTATGGATGCAGACCTGATCTTAGTATTGGATCAAGGAAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTAGCTACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T4M1T3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.225

100

0.666