Detailed information NTG0516898

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KZO17_RS20930
• Genome accession: NZ_CP080080
• Coordinates: 4337233..4338258 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 19SZHZ886Rt
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4332233..4343258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZO17_RS20910 (KZO17_20865)	metJ	4333294..4333611 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KZO17_RS20915 (KZO17_20870)	yiiX	4333795..4334403 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KZO17_RS20920 (KZO17_20875)	rpmE	4334464..4334676 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KZO17_RS20925 (KZO17_20880)	priA	4334879..4337077 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
KZO17_RS20930 (KZO17_20885)	cytR	4337233..4338258 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KZO17_RS20935 (KZO17_20890)	ftsN	4338350..4339309 (+)	960	WP_000068828.1	cell division protein FtsN	-
KZO17_RS20940 (KZO17_20895)	hslV	4339402..4339932 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KZO17_RS20945 (KZO17_20900)	hslU	4339942..4341273 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KZO17_RS20950 (KZO17_20905)	menA	4341340..4342266 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KZO17_RS20955 (KZO17_20910)	rraA	4342359..4342844 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KZO17_RS20960 (KZO17_20915)	zapB	4342929..4343174 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=516898 KZO17_RS20930 WP_000644904.1 4337233..4338258(+) (cytR) [Escherichia coli strain 19SZHZ886Rt]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=516898 KZO17_RS20930 WP_000644904.1 4337233..4338258(+) (cytR) [Escherichia coli strain 19SZHZ886Rt]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACACGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628