Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   I6H72_RS09360 Genome accession   NZ_CP066055
Coordinates   1842276..1842572 (+) Length   98 a.a.
NCBI ID   WP_020997975.1    Uniprot ID   U2ZJ70
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1837276..1847572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS09325 (I6H72_09325) - 1837655..1838962 (+) 1308 WP_003030075.1 ISLre2 family transposase -
  I6H72_RS09330 (I6H72_09330) - 1839525..1840139 (+) 615 WP_134970310.1 hypothetical protein -
  I6H72_RS09335 (I6H72_09335) - 1840158..1840640 (+) 483 WP_198457929.1 hypothetical protein -
  I6H72_RS09340 (I6H72_09340) - 1840621..1841031 (+) 411 WP_006268286.1 hypothetical protein -
  I6H72_RS09345 (I6H72_09345) - 1841270..1841500 (+) 231 WP_022525741.1 hypothetical protein -
  I6H72_RS09350 (I6H72_09350) - 1841580..1841855 (+) 276 WP_006268376.1 terminase small subunit -
  I6H72_RS09355 (I6H72_09355) - 1841921..1842286 (+) 366 WP_006268450.1 type II toxin-antitoxin system RelE/ParE family toxin -
  I6H72_RS09360 (I6H72_09360) HI0659 1842276..1842572 (+) 297 WP_020997975.1 helix-turn-helix domain-containing protein Machinery gene
  I6H72_RS09365 (I6H72_09365) - 1842594..1843799 (+) 1206 WP_020997974.1 hypothetical protein -
  I6H72_RS09370 (I6H72_09370) - 1843806..1843973 (+) 168 WP_006268192.1 hypothetical protein -
  I6H72_RS09375 (I6H72_09375) pbp2b 1844337..1846397 (+) 2061 WP_198457930.1 penicillin-binding protein PBP2B -
  I6H72_RS09380 (I6H72_09380) recR 1846408..1847004 (+) 597 WP_198457931.1 recombination mediator RecR -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10755.42 Da        Isoelectric Point: 4.8898

>NTDB_id=516891 I6H72_RS09360 WP_020997975.1 1842276..1842572(+) (HI0659) [Streptococcus constellatus strain FDAARGOS_1015]
MKNSAIGSNWKDVRAELFSKEEILESDMRVAIMSELIEARNERGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEGEQIS

Nucleotide


Download         Length: 297 bp        

>NTDB_id=516891 I6H72_RS09360 WP_020997975.1 1842276..1842572(+) (HI0659) [Streptococcus constellatus strain FDAARGOS_1015]
ATGAAAAATAGTGCAATTGGTAGTAACTGGAAAGATGTAAGAGCTGAGTTATTCAGCAAAGAAGAAATTTTAGAAAGTGA
TATGCGTGTGGCTATCATGAGTGAGCTTATCGAGGCTAGGAATGAAAGGGGTATTAGTCAGAAAAAACTAGAGGAGCTGA
GTGGTGTTAGTCAGCCAGTCATAGCTAGAATGGAGACAGGAAAAACAAGCCCACAGCTTGATACCGTTTTAAAAGTATTA
GCAAGTCTTGGTAAGACGTTGGCTGTTGTACCCTTAGAGGGCGAACAGATAAGCTAG

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U2ZJ70

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

92.857

0.551