Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6H72_RS08290 Genome accession   NZ_CP066055
Coordinates   1649645..1651405 (+) Length   586 a.a.
NCBI ID   WP_020998020.1    Uniprot ID   U2XWX9
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1644645..1656405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS08270 (I6H72_08270) - 1645403..1645813 (+) 411 WP_119056604.1 peptide deformylase -
  I6H72_RS08275 (I6H72_08275) - 1646080..1647267 (+) 1188 WP_198457828.1 NADH-dependent flavin oxidoreductase -
  I6H72_RS08280 (I6H72_08280) - 1647438..1647896 (+) 459 WP_003070542.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6H72_RS08285 (I6H72_08285) rcrP 1647889..1649655 (+) 1767 WP_198457829.1 ABC transporter ATP-binding protein Regulator
  I6H72_RS08290 (I6H72_08290) rcrQ 1649645..1651405 (+) 1761 WP_020998020.1 ABC transporter ATP-binding protein Regulator
  I6H72_RS08295 (I6H72_08295) - 1651615..1651929 (+) 315 WP_021002020.1 PTS cellobiose transporter subunit IIB -
  I6H72_RS08300 (I6H72_08300) - 1651940..1652260 (+) 321 WP_003031767.1 PTS cellobiose transporter subunit IIA -
  I6H72_RS08305 (I6H72_08305) - 1652394..1653791 (-) 1398 WP_020998019.1 glycoside hydrolase family 1 protein -
  I6H72_RS08310 (I6H72_08310) celB 1653934..1655202 (+) 1269 WP_198457830.1 PTS cellobiose transporter subunit IIC -
  I6H72_RS08315 (I6H72_08315) - 1655236..1655961 (+) 726 WP_003070533.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 65232.50 Da        Isoelectric Point: 6.6736

>NTDB_id=516888 I6H72_RS08290 WP_020998020.1 1649645..1651405(+) (rcrQ) [Streptococcus constellatus strain FDAARGOS_1015]
MENKKSSLFSQVKPYIKGFQFPLLVAFVGAMLSSVITVYGPVKLKEITNLITEGMRSRIDLKAISNIALFLAVLYAVGTV
LNYMQSFIISSVVQHFSKRLRTAIAEKINKLPLRYFDSHSQGDTLSRVTNDVDTVGQSLNQSLGTVISSSLLLIAVLFMM
FYNNVVLSFVTIGSVLIGFVFVALIMGKSQRFFRAQQENLASVNGYVEEMYSGHNVIVSYNATEESKKAFQMLNTNLYSS
MWKSQFISGIMMPLMIFIGNFGYVMVVLVGASMALNGDVTMGTIVAFMVYVRTFSQPLSQIAQGITTLQQASAAMGRVFE
FLAEPEMENDEHKSQQLTTLKGDVTFDKVFFGYNPDRTIIHDFSAKAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIEKGR
ITIDGVDTKQMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQKNISDEAVVAATKVVGVHHFIKTLPKGYETVLDDTVSL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRNGNIIEQGN
HDQLMEENGFYADLYNSQFDEDAEYA

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=516888 I6H72_RS08290 WP_020998020.1 1649645..1651405(+) (rcrQ) [Streptococcus constellatus strain FDAARGOS_1015]
ATGGAAAATAAAAAATCATCTTTATTTAGCCAAGTGAAACCCTATATCAAAGGATTCCAGTTTCCATTGCTCGTTGCATT
TGTGGGAGCAATGCTATCTAGTGTTATCACGGTTTATGGTCCGGTCAAATTAAAAGAAATTACCAATCTTATCACAGAAG
GAATGAGAAGTCGGATTGATCTGAAGGCGATCTCTAATATTGCTCTTTTCTTAGCCGTTTTATATGCGGTGGGTACTGTA
TTAAATTATATGCAATCCTTTATTATTTCGTCCGTCGTTCAGCATTTTTCAAAACGTTTACGGACAGCCATTGCGGAGAA
AATTAATAAATTACCCTTGCGGTATTTTGATAGCCATTCGCAAGGGGACACTCTTTCACGAGTCACTAATGACGTGGATA
CTGTTGGACAATCTCTGAACCAAAGTTTAGGCACAGTGATTTCATCAAGTTTGCTTCTTATTGCTGTTCTCTTTATGATG
TTTTATAACAACGTGGTTCTATCCTTTGTAACGATTGGATCGGTTTTGATTGGTTTTGTCTTTGTTGCGTTGATTATGGG
TAAATCACAACGGTTTTTCCGCGCACAACAAGAGAATCTTGCTAGTGTCAATGGATATGTGGAAGAGATGTATTCTGGTC
ACAATGTCATTGTCAGCTATAATGCTACCGAGGAATCAAAAAAAGCCTTTCAAATGCTTAATACTAATCTTTATAGTAGT
ATGTGGAAGTCCCAATTTATTTCTGGAATTATGATGCCGTTAATGATATTTATAGGGAACTTTGGTTATGTGATGGTTGT
ATTGGTTGGAGCGAGCATGGCATTGAATGGTGATGTCACGATGGGGACGATTGTTGCCTTTATGGTATATGTACGGACTT
TTTCTCAACCATTGTCCCAAATTGCACAAGGGATTACCACTCTTCAACAAGCTAGTGCTGCTATGGGGCGTGTATTTGAG
TTTTTAGCAGAGCCGGAAATGGAAAACGATGAGCACAAGTCTCAACAGCTCACAACTTTAAAGGGTGATGTTACCTTTGA
TAAGGTATTCTTTGGCTACAATCCGGATCGAACAATTATTCATGATTTTTCTGCCAAGGCTAAAGCCGGACAAAAGATTG
CCATTGTCGGTCCGACCGGTGCTGGGAAAACGACGATTGTCAATCTGTTGATGAAATTTTATGAAATTGAGAAAGGGCGG
ATTACTATTGATGGTGTTGATACCAAGCAAATGAAACGCTCTGAAGTGCATGATGCTTTCTCAATGGTCCTTCAAGACAC
TTGGTTATTTGAGGGAACGATTAAAGAAAATTTGATTTACAATCAGAAGAATATTTCTGATGAAGCGGTTGTGGCAGCGA
CTAAAGTTGTCGGGGTCCATCACTTTATCAAGACTTTGCCAAAAGGATACGAGACAGTGTTGGATGACACAGTCAGTCTT
TCTGTTGGGCAAAAGCAATTGCTGACTATCGCGCGTGCACTTCTTAAGGATGCTCCCTTACTTATCTTGGATGAAGCAAC
TTCATCTGTTGATACGCGGACAGAAGAATTGATCCAAAAAGCGATGGATAAGTTGATGGAAGGAAGGACTTCTTTCGTCA
TTGCTCACCGCTTGTCGACCATTCGTAATGCTGATTTGATTTTGGTCATGCGTAATGGTAATATCATTGAACAAGGAAAT
CACGATCAATTGATGGAAGAAAATGGCTTCTATGCTGATCTTTACAATAGTCAATTCGATGAAGATGCAGAGTATGCGTA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U2XWX9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

70.79

99.317

0.703