Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6H72_RS08285 Genome accession   NZ_CP066055
Coordinates   1647889..1649655 (+) Length   588 a.a.
NCBI ID   WP_198457829.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1642889..1654655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS08265 (I6H72_08265) scrK 1644438..1645337 (+) 900 WP_003074417.1 fructokinase ScrK -
  I6H72_RS08270 (I6H72_08270) - 1645403..1645813 (+) 411 WP_119056604.1 peptide deformylase -
  I6H72_RS08275 (I6H72_08275) - 1646080..1647267 (+) 1188 WP_198457828.1 NADH-dependent flavin oxidoreductase -
  I6H72_RS08280 (I6H72_08280) - 1647438..1647896 (+) 459 WP_003070542.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6H72_RS08285 (I6H72_08285) rcrP 1647889..1649655 (+) 1767 WP_198457829.1 ABC transporter ATP-binding protein Regulator
  I6H72_RS08290 (I6H72_08290) rcrQ 1649645..1651405 (+) 1761 WP_020998020.1 ABC transporter ATP-binding protein Regulator
  I6H72_RS08295 (I6H72_08295) - 1651615..1651929 (+) 315 WP_021002020.1 PTS cellobiose transporter subunit IIB -
  I6H72_RS08300 (I6H72_08300) - 1651940..1652260 (+) 321 WP_003031767.1 PTS cellobiose transporter subunit IIA -
  I6H72_RS08305 (I6H72_08305) - 1652394..1653791 (-) 1398 WP_020998019.1 glycoside hydrolase family 1 protein -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65306.15 Da        Isoelectric Point: 6.9916

>NTDB_id=516887 I6H72_RS08285 WP_198457829.1 1647889..1649655(+) (rcrP) [Streptococcus constellatus strain FDAARGOS_1015]
MVKLFKRLTVKEVGMIIISILFTCLAVYLDLEVPTYISKITELLQMKGTVVSDLWNPGLKMIGLSFASFLSAVVVGFIAA
RLAASFTTSLRSDIFNRVLDYSNAEIKRFSIPSLLTRTTNDLTQIQLMITMGLQVVTRGPIMAIWAITKIIGKSEYWLWA
VIVAVIVNMIMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDDKFAGANDEVTRLNLFVSRLMAI
LNPIMMGISSGLTLAIYWIGAYLIQDAVLSGRLPIFSDMVVFMSYAMQVVMGFMLMAALFIVLPRTLVSAGRINEVLDLH
STIESPMQPKTAKDVKGEVVFDNVSFRYTKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLISLIPRFYDVTEGRILVD
GVNVKDYQLEDLHNKVGYIPQKAVLFSGDIKSNLDFGQSNESPLDDEKMWAALDLAQARSFVEEKEDGLHSEVAQSGTNF
SGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILREELAKKVKATTRLIVAQRISTIMDADQILVLDKGKVVGQGT
HKELLATNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=516887 I6H72_RS08285 WP_198457829.1 1647889..1649655(+) (rcrP) [Streptococcus constellatus strain FDAARGOS_1015]
ATGGTTAAATTGTTTAAACGTTTAACTGTCAAAGAAGTAGGGATGATTATCATCAGTATCTTATTTACTTGTTTGGCAGT
TTATTTGGACTTAGAGGTTCCAACCTATATTTCAAAAATTACGGAACTCCTACAGATGAAAGGAACGGTCGTTTCTGATT
TGTGGAATCCGGGCTTGAAAATGATTGGATTGTCATTTGCTAGTTTTCTCAGTGCTGTGGTAGTTGGTTTTATTGCGGCT
AGATTGGCAGCTAGCTTTACAACGAGCTTGCGCTCAGATATTTTCAATCGTGTACTGGATTATTCAAATGCTGAGATTAA
GAGATTTTCTATTCCAAGTCTTTTAACGCGGACAACCAATGATCTTACGCAAATTCAGCTTATGATTACTATGGGCTTGC
AAGTCGTGACTCGTGGACCGATTATGGCGATTTGGGCGATTACAAAAATCATTGGGAAATCAGAATACTGGCTGTGGGCA
GTTATTGTCGCAGTTATTGTGAATATGATTATGACGACAGTTTTGATGACGTTGGCCTTTCCAAAGCAATCTGTTATTCA
ACGGTTGACTGATAAGTTAAATAGTATTACGCGTGAAAGTCTAACAGGGATTCGTGTTGTTCGAGCTTACAATGCTGAAG
ACTATCAAGATGATAAATTTGCAGGGGCAAATGATGAAGTGACTCGGTTGAATCTCTTTGTTAGTCGGCTCATGGCTATT
TTAAATCCGATTATGATGGGGATTTCGAGTGGTTTGACCTTGGCAATATACTGGATTGGTGCTTACTTGATTCAAGATGC
AGTTTTATCAGGACGTTTGCCAATCTTTAGTGACATGGTTGTCTTTATGTCCTATGCTATGCAGGTCGTAATGGGCTTCA
TGCTCATGGCTGCTCTGTTTATCGTTCTTCCTCGTACCTTGGTGTCTGCGGGACGGATTAATGAGGTACTTGATTTGCAT
TCAACGATTGAATCTCCAATGCAACCCAAAACAGCTAAAGATGTCAAAGGTGAAGTGGTATTTGACAATGTTTCTTTCCG
CTATACTAAAAACTCTGAGGCTGTCATTGAACATGTTAGCTTTACAGCTAAAGCGGGCGAAACGGTAGCTTTCATCGGAT
CAACTGGTTCTGGGAAATCAACCCTAATTAGTTTAATTCCTCGTTTCTATGATGTGACAGAAGGAAGAATTTTAGTAGAT
GGCGTGAATGTAAAAGATTATCAGTTGGAAGATTTGCATAATAAAGTTGGCTACATTCCACAAAAAGCTGTCCTCTTCTC
TGGTGATATAAAGAGTAATTTAGACTTTGGACAAAGCAATGAAAGTCCCTTAGATGATGAAAAAATGTGGGCTGCATTGG
ACTTGGCACAGGCGAGATCATTTGTTGAAGAAAAAGAAGATGGTCTGCACTCAGAGGTCGCACAAAGCGGAACCAATTTC
TCTGGTGGTCAAAAGCAGCGGCTGGCGATTGCGCGTGCACTTGCTAGGAAACCTGAAATTCTGATTTTTGACGATTCATT
TTCAGCACTGGACTATAAGACAGACCGTATTTTGCGAGAAGAATTGGCGAAAAAAGTGAAAGCTACAACCAGATTGATCG
TAGCTCAGCGGATTTCAACGATCATGGATGCCGATCAGATCTTGGTGTTGGATAAAGGGAAAGTTGTTGGGCAAGGAACT
CACAAAGAGCTGCTAGCGACAAACGAAGTTTATCAAGAAATTGCTTACTCACAATTATCAAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(16-291)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

70.333

100

0.718