Detailed information NTG0516869

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: I6H72_RS07380
• Genome accession: NZ_CP066055
• Coordinates: 1449175..1450593 (+)
• Length: 472 a.a.
• NCBI ID: WP_198457767.1
• Uniprot ID: -
• Organism: Streptococcus constellatus strain FDAARGOS_1015
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1444175..1455593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H72_RS07360 (I6H72_07360)	galU	1445220..1446119 (-)	900	WP_006268010.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
I6H72_RS07365 (I6H72_07365)	-	1446145..1447161 (-)	1017	WP_006268051.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	-
I6H72_RS10345	-	1447246..1447425 (+)	180	Protein_1431	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	-
I6H72_RS07370 (I6H72_07370)	-	1447644..1448678 (+)	1035	WP_198457765.1	S66 peptidase family protein	-
I6H72_RS07375 (I6H72_07375)	-	1448772..1449215 (+)	444	WP_198457766.1	dUTP diphosphatase	-
I6H72_RS07380 (I6H72_07380)	radA	1449175..1450593 (+)	1419	WP_198457767.1	DNA repair protein RadA	Machinery gene
I6H72_RS07385 (I6H72_07385)	gltX	1450832..1452289 (+)	1458	WP_006268479.1	glutamate--tRNA ligase	-
I6H72_RS07390 (I6H72_07390)	-	1452745..1453272 (+)	528	WP_198457768.1	5-formyltetrahydrofolate cyclo-ligase	-
I6H72_RS07395 (I6H72_07395)	-	1453265..1453945 (+)	681	WP_198457769.1	rhomboid family intramembrane serine protease	-
I6H72_RS07400 (I6H72_07400)	-	1454003..1454839 (-)	837	WP_006268080.1	putative RNA methyltransferase	-

Sequence

Protein

• Length: 472 a.a.
• Molecular weight: 51620.50 Da
• Isoelectric Point: 5.8413

>NTDB_id=516869 I6H72_RS07380 WP_198457767.1 1449175..1450593(+) (radA) [Streptococcus constellatus strain FDAARGOS_1015]
MVCGQVVLEALGIKKEESIIAKKKSTFVCQNCEYHSPKYLGRCPNCGAWSSFVEEVEVAEVKNARVSLTGEKIRPMKLAE
VTSIDVKRTKTDMDEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSHQGTVLYVSGEESAEQIKLRAERLGDID
SEFYLYAETNMQNIRTEIEKIKPDFLIIDSIQTIMSPEISSMQGSVSQVREVTAELMQLAKTNNIATFIVGHMTKEGTLA
GPRTLEHMVDTVLYFEGERQHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTR
PILAEVQALVTPTMFGNAKRTTAGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDR
PTSPQDCFIGEIGLTGEIRRVNRIEQRITEAVKLGFTKIYVPKNSLNGLNIPEKTEVIGVTTIGEVLKKVFG

Nucleotide

• Length: 1419 bp

>NTDB_id=516869 I6H72_RS07380 WP_198457767.1 1449175..1450593(+) (radA) [Streptococcus constellatus strain FDAARGOS_1015]
ATGGTGTGCGGACAGGTGGTTTTGGAAGCACTGGGCATTAAGAAAGAGGAATCTATCATAGCCAAGAAAAAATCGACATT
TGTTTGTCAAAATTGTGAATACCATTCGCCCAAGTATCTGGGGCGTTGTCCGAATTGTGGTGCTTGGTCGTCTTTTGTCG
AAGAAGTAGAAGTGGCAGAAGTCAAAAATGCGCGTGTTTCTCTGACCGGAGAAAAAATACGACCGATGAAATTGGCAGAA
GTAACTTCTATTGATGTGAAGCGCACCAAGACGGATATGGATGAGTTCAATCGTGTGCTGGGTGGTGGCGTAGTGCCGGG
CAGTCTGGTCTTGATTGGCGGAGATCCCGGTATCGGGAAGTCCACTCTGCTTCTGCAAGTATCCACCCAGCTTTCTCATC
AGGGTACTGTCCTTTATGTCAGTGGGGAGGAATCAGCTGAGCAGATTAAGCTGCGGGCGGAACGGCTCGGTGATATTGAC
AGTGAATTTTATCTCTACGCCGAGACCAATATGCAAAATATCCGCACAGAGATTGAGAAAATCAAGCCAGATTTTCTGAT
TATTGACTCTATACAGACGATTATGTCGCCAGAAATTTCCAGCATGCAGGGCTCGGTTTCGCAAGTGCGGGAGGTGACAG
CAGAACTCATGCAGTTGGCGAAAACCAATAATATTGCCACCTTTATCGTTGGTCATATGACCAAGGAAGGAACGCTGGCT
GGTCCACGAACGCTAGAGCATATGGTAGATACAGTGCTGTATTTTGAAGGAGAACGTCAGCATACTTTCCGCATTTTGCG
GGCAGTTAAAAATCGTTTCGGTTCGACCAACGAAATCGGCATTTTTGAGATGCAGTCAGGTGGTCTGGTTGAAGTGCTCA
ATCCTAGTCAGGTTTTCTTAGAGGAGCGTTTAGATGGTGCGACAGGCTCTTCTATCGTGGTGACGATGGAGGGGACACGA
CCGATTTTGGCGGAAGTGCAGGCTTTGGTGACACCGACCATGTTTGGCAATGCCAAGCGGACAACGGCAGGTCTGGACTT
CAATCGTGCCAGCCTGATTATGGCTGTTTTGGAGAAACGAGCTGGTTTGCTTCTGCAAAATCAAGATGCTTATCTCAAAT
CAGCTGGCGGTGTCAAATTAGATGAGCCAGCCATTGACTTAGCTGTCGCAGTGGCGATTGCGTCTAGCTATAAGGATCGA
CCGACTAGTCCACAAGACTGCTTTATTGGCGAAATTGGTCTGACAGGCGAAATCCGCCGTGTCAATCGCATTGAGCAGCG
CATCACCGAAGCTGTTAAGTTAGGCTTCACAAAAATTTATGTTCCTAAAAACTCTTTGAACGGATTGAATATTCCCGAAA
AGACTGAAGTTATTGGTGTGACAACGATTGGTGAAGTATTGAAGAAGGTGTTTGGGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (84-237)

• Subunit ChlI of Mg-chelatase (ChlI) (380-444)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (27-54)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus mitis NCTC 12261	90.508	95.975	0.869
radA	Streptococcus pneumoniae Rx1	90.287	95.975	0.867
radA	Streptococcus pneumoniae D39	90.287	95.975	0.867
radA	Streptococcus pneumoniae R6	90.287	95.975	0.867
radA	Streptococcus pneumoniae TIGR4	90.287	95.975	0.867
radA	Streptococcus mitis SK321	90.287	95.975	0.867
radA	Bacillus subtilis subsp. subtilis str. 168	62.144	96.822	0.602