Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6H72_RS06350 Genome accession   NZ_CP066055
Coordinates   1266855..1267622 (-) Length   255 a.a.
NCBI ID   WP_198457704.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1261855..1272622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS06325 (I6H72_06325) ychF 1261944..1263059 (-) 1116 WP_006268857.1 redox-regulated ATPase YchF -
  I6H72_RS06330 (I6H72_06330) - 1263206..1263706 (+) 501 WP_198457703.1 YehR family lipoprotein -
  I6H72_RS06335 (I6H72_06335) - 1263793..1263990 (-) 198 WP_003071662.1 DUF951 domain-containing protein -
  I6H72_RS06340 (I6H72_06340) dnaN 1263990..1265126 (-) 1137 WP_006268813.1 DNA polymerase III subunit beta -
  I6H72_RS06345 (I6H72_06345) dnaA 1265283..1266626 (-) 1344 WP_020997506.1 chromosomal replication initiator protein DnaA -
  I6H72_RS06350 (I6H72_06350) spo0J 1266855..1267622 (-) 768 WP_198457704.1 ParB/RepB/Spo0J family partition protein Regulator
  I6H72_RS06355 (I6H72_06355) htrA 1267677..1268867 (-) 1191 WP_198457705.1 S1C family serine protease Regulator
  I6H72_RS06360 (I6H72_06360) rlmH 1269072..1269551 (+) 480 WP_006268880.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6H72_RS06370 (I6H72_06370) - 1269834..1269980 (+) 147 WP_006268843.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  I6H72_RS06375 (I6H72_06375) comD/comD1 1270000..1271313 (+) 1314 WP_232619560.1 GHKL domain-containing protein Regulator
  I6H72_RS06380 (I6H72_06380) comE 1271313..1272062 (+) 750 WP_003071650.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29682.16 Da        Isoelectric Point: 9.5149

>NTDB_id=516862 I6H72_RS06350 WP_198457704.1 1266855..1267622(-) (spo0J) [Streptococcus constellatus strain FDAARGOS_1015]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELASSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPLNIIEAIKERNISQGHA
RLLINLSEKEQNQWFDKILSQSLSVRQLEKQLHPHQKKTSAKNKYQLFLKEEENRLKKIFGTEISLQFSKQSQSGKICIH
FSSQEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=516862 I6H72_RS06350 WP_198457704.1 1266855..1267622(-) (spo0J) [Streptococcus constellatus strain FDAARGOS_1015]
ATGGAAAAATATCAATATATCACACTTAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAGTTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGCTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTGATTGACAAAGGGTTGACACATAAAGAAATCGCTCTAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCCGTCCGGTTATTAAATTTACCTCTCAATATTATCGAAGCGATAAAAGAAAGAAATATTTCTCAGGGACACGCT
CGTCTGCTCATTAATCTCTCAGAAAAAGAGCAAAATCAGTGGTTTGATAAAATCTTATCTCAAAGCCTTTCAGTTCGACA
GCTAGAAAAACAATTGCATCCACATCAAAAAAAGACTTCAGCAAAAAACAAGTACCAACTTTTTCTCAAAGAAGAAGAAA
ACAGATTAAAAAAGATATTCGGTACAGAAATCTCACTCCAATTTTCTAAGCAATCGCAATCTGGAAAAATCTGTATTCAC
TTTTCAAGTCAAGAAGAATATCAAAGAATTATTGATAGCTTTAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-190)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.333

100

0.533