Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   I6H72_RS03890 Genome accession   NZ_CP066055
Coordinates   791965..792678 (+) Length   237 a.a.
NCBI ID   WP_006267488.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 786965..797678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS03880 (I6H72_03880) treC 787966..789597 (-) 1632 WP_198458331.1 alpha,alpha-phosphotrehalase -
  I6H72_RS03885 (I6H72_03885) treP 789778..791790 (-) 2013 WP_150225611.1 PTS system trehalose-specific EIIBC component -
  I6H72_RS03890 (I6H72_03890) treR 791965..792678 (+) 714 WP_006267488.1 trehalose operon repressor Regulator
  I6H72_RS03895 (I6H72_03895) - 792733..794073 (-) 1341 WP_198458332.1 hemolysin family protein -
  I6H72_RS03900 (I6H72_03900) - 794187..795833 (-) 1647 WP_150225610.1 phosphoenolpyruvate carboxykinase (ATP) -
  I6H72_RS03905 (I6H72_03905) - 796080..797204 (-) 1125 WP_198458333.1 AI-2E family transporter -
  I6H72_RS03910 (I6H72_03910) - 797329..797499 (-) 171 WP_198458334.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27775.86 Da        Isoelectric Point: 9.4377

>NTDB_id=516844 I6H72_RS03890 WP_006267488.1 791965..792678(+) (treR) [Streptococcus constellatus strain FDAARGOS_1015]
MKKYEQIFKFIEQDILNEKYQVNDYLPSEHELVQTYKVSRDTIRKSLDLLQKAGLIQKLKGQGSKVTKQEQIDFPVSNLT
SYQELVQQHGINSKTNVIQLEKITVDKKLSNLTGFPEYRLVWRIVRQRVVDDVASVLDIDYLDKSLVPSMTREIAEQSIY
AYLEGKLGLHIAYAQKEITIDLATNRDKILMDIENDQHVVSVKSKVYLTDGQQFQFTDSRHKLEKFRFIDFAKRQKR

Nucleotide


Download         Length: 714 bp        

>NTDB_id=516844 I6H72_RS03890 WP_006267488.1 791965..792678(+) (treR) [Streptococcus constellatus strain FDAARGOS_1015]
ATGAAGAAATATGAACAAATTTTTAAATTCATAGAACAAGATATTCTAAATGAAAAATATCAAGTTAATGATTATCTCCC
TAGCGAGCATGAACTCGTCCAAACCTACAAAGTCAGCCGTGATACCATTCGCAAGTCACTTGATTTACTTCAAAAAGCTG
GTCTTATCCAAAAACTGAAAGGGCAGGGCTCTAAAGTTACTAAACAAGAACAGATTGACTTTCCTGTCTCCAATCTGACT
AGTTACCAAGAACTCGTGCAACAGCATGGGATAAATTCTAAAACAAATGTCATTCAGTTAGAAAAAATCACGGTTGATAA
AAAGTTATCCAATCTCACAGGCTTTCCTGAATACCGTCTGGTATGGCGAATTGTCCGCCAGAGAGTAGTCGATGACGTCG
CTTCCGTCTTAGATATTGATTACCTTGATAAGAGCCTTGTCCCTTCCATGACTCGAGAAATAGCAGAACAATCGATTTAT
GCTTATCTAGAAGGAAAACTAGGGCTGCACATTGCTTATGCCCAAAAAGAAATCACAATTGATCTAGCTACAAACCGCGA
TAAAATTTTGATGGACATTGAAAATGATCAACACGTCGTTTCTGTTAAATCCAAAGTCTATCTTACAGATGGACAGCAAT
TCCAATTCACAGATAGCCGCCATAAACTGGAAAAATTCCGTTTTATTGACTTTGCTAAGCGACAAAAACGATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(90-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

65.254

99.578

0.65