Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   I6H72_RS03360 Genome accession   NZ_CP066055
Coordinates   681656..683458 (-) Length   600 a.a.
NCBI ID   WP_003069865.1    Uniprot ID   A0AAD2Y3Y8
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 676656..688458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS03345 (I6H72_03345) - 679220..679789 (-) 570 WP_080654547.1 LURP-one-related/scramblase family protein -
  I6H72_RS03350 (I6H72_03350) prsA 679927..680865 (-) 939 WP_003069861.1 peptidylprolyl isomerase PrsA -
  I6H72_RS03355 (I6H72_03355) - 680972..681655 (-) 684 WP_198458299.1 O-methyltransferase -
  I6H72_RS03360 (I6H72_03360) pepF 681656..683458 (-) 1803 WP_003069865.1 oligoendopeptidase F Regulator
  I6H72_RS03365 (I6H72_03365) coiA 683478..684440 (-) 963 WP_195405204.1 competence protein CoiA Machinery gene
  I6H72_RS03370 (I6H72_03370) celB 684529..685872 (-) 1344 WP_150225629.1 PTS cellobiose transporter subunit IIC -
  I6H72_RS03375 (I6H72_03375) - 685912..686418 (-) 507 WP_020997691.1 hypothetical protein -
  I6H72_RS03380 (I6H72_03380) - 686441..686758 (-) 318 WP_006267580.1 PTS cellobiose transporter subunit IIA -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69382.75 Da        Isoelectric Point: 4.6883

>NTDB_id=516839 I6H72_RS03360 WP_003069865.1 681656..683458(-) (pepF) [Streptococcus constellatus strain FDAARGOS_1015]
MAKQRNEIEEKYTWDLTTIFPTDEAFEMELAQVSKELKEASHLAGHLLDSADSLLKTTDIQMDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQVFAFYEPEFMAITDEQYQVFLVEKPELQIYQHFFDKLLQKKPHILSQREEELLAGA
GEIFSAAGDTFGILDNADIVFPIVHDEEGNEVQLTHGNYISLVESKNRTVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRKFSSAREAALSANFIPESVYESLVSAVNKHLPLLHRYVQLRAKILGISDLKMYDVYTPLSEIDYKFTYEAALT
KAEEVLAILGDDYLNRVKKAFSERWIDVCENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDQTRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNNLYADLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYATGFSAASALADKIVNGTQEDKEKYLHYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=516839 I6H72_RS03360 WP_003069865.1 681656..683458(-) (pepF) [Streptococcus constellatus strain FDAARGOS_1015]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGATTTAACGACGATTTTCCCAACGGATGAAGCGTTTGA
AATGGAATTAGCGCAAGTTTCAAAGGAATTAAAAGAAGCTAGTCATTTAGCAGGTCATCTTTTGGATTCAGCCGATAGCC
TTTTAAAAACGACAGACATCCAAATGGATTTAATGCGTCGTATTGAAAAGCTCTATTCCTATGCTCACATGAAAAATGAC
CAAGATACGCGTGTGGCAAAATATCAAGAGTATCAAGCCAAGGGCATGGCTATTTATAGCGAGTTCGGGCAGGTGTTTGC
TTTCTATGAGCCAGAATTTATGGCAATTACAGATGAACAGTATCAGGTTTTCTTAGTTGAAAAACCTGAATTGCAAATCT
ATCAGCACTTCTTTGACAAGTTATTGCAAAAGAAACCTCACATCCTTTCTCAACGCGAGGAAGAATTGTTGGCAGGTGCT
GGTGAAATTTTTAGTGCTGCTGGTGATACTTTTGGAATTTTGGACAATGCCGATATCGTCTTTCCAATTGTACATGATGA
AGAAGGCAATGAAGTACAATTGACGCATGGAAATTACATTAGCTTAGTGGAGTCAAAAAATCGTACAGTCCGTAAGGAAG
CTTATGAAGCACTTTATAGCGTTTATGAACAATATCAACATACTTATGCTAAGACACTCCAAACAAATGTTAAGGTGCAT
AATTACAATGCAAAAGTACGTAAGTTTTCTTCGGCACGCGAAGCAGCCTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGAGAGTTTGGTGTCTGCAGTCAACAAACATTTACCACTCTTACATCGCTATGTTCAGTTACGAGCTAAGATTTTAGGCA
TTTCAGATCTCAAGATGTATGACGTTTATACACCGCTATCAGAGATAGATTATAAATTTACCTATGAAGCAGCTTTGACG
AAAGCGGAAGAAGTTTTAGCAATTCTTGGAGATGATTATCTTAACCGAGTGAAAAAAGCCTTTTCAGAGCGTTGGATTGA
TGTTTGTGAGAATCAAGGTAAACGGTCAGGGGCTTATTCTGGTGGCTCTTACGATACTAATGCTTTTATGTTGCTGAATT
GGCAAGATACCTTAGATAATCTCTTCACCTTGGTTCATGAAACGGGTCACAGTATGCATTCTAGCTATACTCGTGAAACA
CAGCCTTATGTTTATGGTGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACTACCAATGAAAATATACTGACGGAGAA
ATTATTGGAAGAAGTAGATGACGATCAAACTCGTTTTGCGATTCTGAATCATTTCTTGGATGGCTTCCGCGGAACTGTTT
TCCGCCAAACTCAATTTGCTGAGTTTGAGCATGCTATCCATAAGGCTGATCAAGAAGGTCAAGTCTTAACTAGTGAATTT
TTGAATAATTTATACGCAGATTTGAACGAAAAATATTATGGCTTGACGAAAGAAGATAATCCACAAATTCAATACGAATG
GGCACGGATTCCTCATTTTTACTATGACTATTATGTATTTCAATATGCGACTGGTTTTTCAGCAGCATCTGCTTTAGCTG
ATAAAATTGTCAATGGAACACAAGAAGATAAAGAGAAATATCTCCATTATCTCAAAGCAGGAAATTCTGATTATCCGCTG
AATGTCATTAAAAAAGCTGGTGTTGATATGGAAAAAGAAGACTATCTCAATGCTGCCTTTGCAGTCTTTGAACGTCGTCT
TGACGAATTTGAAGCACTTGTAGAAAAGTTGGGCTTGGCATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

68.96

99.333

0.685