Detailed information NTG0516751

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KZO16_RS00880
• Genome accession: NZ_CP080075
• Coordinates: 186771..187754 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain 19SZHZ663Rt
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 181771..192754

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZO16_RS00865 (KZO16_00865)	dppA	183071..184678 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KZO16_RS00870 (KZO16_00870)	dppB	184829..185848 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
KZO16_RS00875 (KZO16_00875)	dppC	185858..186760 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KZO16_RS00880 (KZO16_00880)	amiE	186771..187754 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
KZO16_RS00885 (KZO16_00885)	dppF	187751..188755 (+)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KZO16_RS00890 (KZO16_00890)	yhjV	188785..190056 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
KZO16_RS00895 (KZO16_00895)	-	190532..190639 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KZO16_RS00900 (KZO16_00900)	-	191015..191122 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KZO16_RS00905 (KZO16_00905)	-	191498..191605 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=516751 KZO16_RS00880 WP_001196496.1 186771..187754(+) (amiE) [Escherichia coli strain 19SZHZ663Rt]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=516751 KZO16_RS00880 WP_001196496.1 186771..187754(+) (amiE) [Escherichia coli strain 19SZHZ663Rt]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401