Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I6I32_RS07165 Genome accession   NZ_CP066041
Coordinates   1504833..1505564 (+) Length   243 a.a.
NCBI ID   WP_057489393.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1499833..1510564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS07140 (I6I32_07140) - 1501338..1501970 (+) 633 WP_198464389.1 DJ-1/PfpI family protein -
  I6I32_RS07145 (I6I32_07145) dnaJ 1502130..1503266 (+) 1137 WP_198464390.1 molecular chaperone DnaJ -
  I6I32_RS07150 (I6I32_07150) - 1503344..1503997 (-) 654 WP_198464391.1 hypothetical protein -
  I6I32_RS07155 (I6I32_07155) - 1504067..1504345 (-) 279 WP_198464392.1 hypothetical protein -
  I6I32_RS07160 (I6I32_07160) - 1504355..1504765 (-) 411 WP_007519264.1 HIT family protein -
  I6I32_RS07165 (I6I32_07165) pptA 1504833..1505564 (+) 732 WP_057489393.1 ABC transporter ATP-binding protein Regulator
  I6I32_RS07170 (I6I32_07170) - 1505561..1506610 (+) 1050 WP_198464393.1 ABC transporter permease -
  I6I32_RS07175 (I6I32_07175) ccrZ 1506658..1507452 (+) 795 WP_000363019.1 cell cycle regulator CcrZ -
  I6I32_RS07180 (I6I32_07180) trmB 1507449..1508084 (+) 636 WP_198464394.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6I32_RS07185 (I6I32_07185) rimP 1508211..1508690 (+) 480 WP_000338695.1 ribosome maturation factor RimP -
  I6I32_RS07190 (I6I32_07190) nusA 1508733..1509869 (+) 1137 WP_084945816.1 transcription termination factor NusA -
  I6I32_RS07195 (I6I32_07195) rnpM 1509891..1510184 (+) 294 WP_000857560.1 RNase P modulator RnpM -
  I6I32_RS07200 (I6I32_07200) - 1510177..1510476 (+) 300 WP_001041396.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27124.62 Da        Isoelectric Point: 4.7792

>NTDB_id=516677 I6I32_RS07165 WP_057489393.1 1504833..1505564(+) (pptA) [Streptococcus oralis strain FDAARGOS_1075]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATNYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIGQKVAFDRVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVLAQGNLQQLREAFNMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=516677 I6I32_RS07165 WP_057489393.1 1504833..1505564(+) (pptA) [Streptococcus oralis strain FDAARGOS_1075]
ATGTTAGAAATTAAAAACCTGACAGGAGGCTATGTTCACGTTCCTGTCTTGAAAGATGTGTCCTTTACAGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACAATCAATGAGATTATTGGACTGTTGACACCTT
ACAGTGGGGAAATTAAGATTAACGGTCTCACCCTGCGAGAAGATGCAACCAACTATCGCAAGCAGATTGGGTATATCCCA
GAAACGCCTAGCTTGTACGAGGAATTGACTCTCAGAGAGCATATCGAGACGGTTGCTATGGCCTATGGTATTGGGCAAAA
AGTGGCTTTTGATCGTGTGGAACCTTTGTTAAAAATGTTTCGTTTGGATCAAAAATTAGACTGGTTCCCAGTGCATTTTT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTCGTAGATCCGAGCCTTTTCATCGTTGATGAGCCTTTT
CTTGGCCTCGATCCGCTGGCCATTTCTGACTTGATTCAGCTTCTAGAAGTGGAAAAGCAAAAAGGCAAGTCCATTCTCAT
GAGTACCCACGTGCTAGACTCAGCAGAAAAGATGTGTGATGCCTTTGTTATCCTTCATAAGGGGGAGGTGCTAGCTCAGG
GGAACCTCCAGCAACTCCGCGAAGCCTTTAATATGCCTGAAGCGAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.029

99.177

0.724
  pptA Streptococcus thermophilus LMD-9

72.199

99.177

0.716