Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6I32_RS06665 Genome accession   NZ_CP066041
Coordinates   1365855..1367615 (+) Length   586 a.a.
NCBI ID   WP_198464352.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1360855..1372615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS06645 (I6I32_06645) - 1362007..1362723 (+) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -
  I6I32_RS06650 (I6I32_06650) - 1362774..1363478 (-) 705 WP_198464349.1 CD20-like domain-containing protein -
  I6I32_RS06655 (I6I32_06655) - 1363651..1364112 (+) 462 WP_198464350.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6I32_RS06660 (I6I32_06660) rcrP 1364096..1365865 (+) 1770 WP_198464351.1 ABC transporter ATP-binding protein Regulator
  I6I32_RS06665 (I6I32_06665) rcrQ 1365855..1367615 (+) 1761 WP_198464352.1 ABC transporter ATP-binding protein Regulator
  I6I32_RS06670 (I6I32_06670) - 1367712..1368215 (+) 504 WP_198464353.1 phosphatase PAP2 family protein -
  I6I32_RS06675 (I6I32_06675) - 1368329..1368775 (+) 447 WP_000776591.1 LytTR family DNA-binding domain-containing protein -
  I6I32_RS06680 (I6I32_06680) - 1368781..1369455 (+) 675 WP_198464354.1 LiaF transmembrane domain-containing protein -
  I6I32_RS06685 (I6I32_06685) rpmB 1369560..1369748 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  I6I32_RS06690 (I6I32_06690) - 1369901..1370266 (+) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -
  I6I32_RS06695 (I6I32_06695) - 1370269..1371936 (+) 1668 WP_070569243.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64561.32 Da        Isoelectric Point: 5.2114

>NTDB_id=516675 I6I32_RS06665 WP_198464352.1 1365855..1367615(+) (rcrQ) [Streptococcus oralis strain FDAARGOS_1075]
MENKKVSVWKQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLATEIDLVAVSNIAGFLVVLYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMIFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKERQLAHMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKAMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTDISDERMMEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGDFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=516675 I6I32_RS06665 WP_198464352.1 1365855..1367615(+) (rcrQ) [Streptococcus oralis strain FDAARGOS_1075]
ATGGAAAATAAAAAAGTTTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTCCCTCTCCTAATAGCAGT
TGTGGCTGCAGTCATTTCAAGCATCATTACCGTTTATGGTCCAACTAAGATTAAAGAAATTACAAACTTGATTTCAGATG
GTTTGGCTACAGAAATCGACTTGGTAGCTGTGTCAAACATTGCTGGATTTTTGGTTGTTCTGTATGTATTTGGAGCTATC
CTTAATTATACACAGGCCTATATCTTTTCAACGAGCATTCAGCATTTTTCAAAACGCTTGCGGACAGCAATCGCTGAAAA
GATTAATCGTTTGCCACTTGGCTATTTTGACCGTCATTCACAAGGAGATACCCTTTCGCGCGTGACCAATGATGTGGATA
CAGCAGCGCAATCTCTCAACCAAAGTCTAGGGACAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGGGATGAACTGGATTTTAGCATTGGTAACAGTTGTATCAACCCTTGTTGGTTTTGCGGCGGTTTCCGTAATCATGGC
CAAGTCACAGGGTTATTTTAAAGCTCAACAAAATAATCTAGCAGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGAC
ACAATGTAGTGACCAGCTACAACGCAGTAGATACCTCCAAAGCGAGATTTGCTGGTTTAAACCAAGACTTGCATGACAGT
ATCTGGAAATCTCAATTTATCTCTGGTATCATGATGCCAGCCATGATTTTTGTTGGGAACTTTAGTTATGTATTAGTCAT
CATCGTTGGAGCTGCGCTGGCGTTAGAAGGGCATATCACTATAGGGATCATTGTAGCCTTTATGGTTTACGTACGGACCT
TCTCCCAACCTCTGTCACAGATTGCCCAAGGGATTACGAGCCTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAA
TTTCTAGCTGAAGCAGAGATGCAGGATGAATCTCATAAGGAAAGACAATTGGCCCATATGAAAGGGGAAGTAGTCTTTGA
TCATGTGTCCTTTGGCTATACACCAGAGCGCACCATCATCCATGATTTTTCTGCGACAGCTCATGCAGGTCAGAAGGTTG
CTATCGTTGGACCGACTGGGGCTGGGAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGATAGATAAGGGAAGT
ATCCGTATCGATGGTGTCGATACCAAGGCTATGAAGCGTTCAGAAGTACACGATGCCTTTTCAATGGTCTTGCAGGACAC
TTGGCTCTTTGAAGGAACCATTCGAGAGAACCTGATCTATAATCAGACAGACATCAGTGATGAACGAATGATGGAAGCCA
GCAAGGCTGTGGGAATCCACCACTTTATCATGACCTTGCCAGATGGCTACGATACTGTTTTGGACGACACCGTGACCTTG
TCTGTCGGACAAAAACAGCTCTTGACCATTGCTCGTGCTTTGCTAAAAGATGCGCCACTCCTAATTCTGGATGAAGCGAC
ATCCTCAGTCGACACACGTACAGAGGAGTTGATTCAAAAAGCCATGGACCGTTTGATGGAAGGTCGAACTTCCTTTGTCA
TCGCCCATCGCTTGTCGACTATCCGTAATGCCGACTTGATTCTTGTCATGAAAGATGGCAATATCATCGAACAAGGCAAT
CACGAGGAGCTGATGGCACAAGGTGACTTCTACGCTGACTTGTACAATAGTCAATTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.61

99.659

0.664