Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6I32_RS06660 Genome accession   NZ_CP066041
Coordinates   1364096..1365865 (+) Length   589 a.a.
NCBI ID   WP_198464351.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1359096..1370865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS06630 (I6I32_06630) - 1359552..1359746 (+) 195 WP_000415528.1 PspC domain-containing protein -
  I6I32_RS06635 (I6I32_06635) - 1359876..1360430 (-) 555 WP_070656881.1 GNAT family N-acetyltransferase -
  I6I32_RS06640 (I6I32_06640) - 1360540..1361910 (+) 1371 WP_198464348.1 MATE family efflux transporter -
  I6I32_RS06645 (I6I32_06645) - 1362007..1362723 (+) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -
  I6I32_RS06650 (I6I32_06650) - 1362774..1363478 (-) 705 WP_198464349.1 CD20-like domain-containing protein -
  I6I32_RS06655 (I6I32_06655) - 1363651..1364112 (+) 462 WP_198464350.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6I32_RS06660 (I6I32_06660) rcrP 1364096..1365865 (+) 1770 WP_198464351.1 ABC transporter ATP-binding protein Regulator
  I6I32_RS06665 (I6I32_06665) rcrQ 1365855..1367615 (+) 1761 WP_198464352.1 ABC transporter ATP-binding protein Regulator
  I6I32_RS06670 (I6I32_06670) - 1367712..1368215 (+) 504 WP_198464353.1 phosphatase PAP2 family protein -
  I6I32_RS06675 (I6I32_06675) - 1368329..1368775 (+) 447 WP_000776591.1 LytTR family DNA-binding domain-containing protein -
  I6I32_RS06680 (I6I32_06680) - 1368781..1369455 (+) 675 WP_198464354.1 LiaF transmembrane domain-containing protein -
  I6I32_RS06685 (I6I32_06685) rpmB 1369560..1369748 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  I6I32_RS06690 (I6I32_06690) - 1369901..1370266 (+) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65416.88 Da        Isoelectric Point: 7.1338

>NTDB_id=516674 I6I32_RS06660 WP_198464351.1 1364096..1365865(+) (rcrP) [Streptococcus oralis strain FDAARGOS_1075]
MKKLAKRITGKEWGMIVLTILFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPAAKMIGLSLLAFFSSVMVGFFAA
RVAASYTTHLRRDVFHRVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VLVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDKKFEAANDEVTRLNLFVNRLMAI
INPIMMAISSGLSLAIYWIGAYIINDASLTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSHAQTADPSVQGQVEFRDVTFRYSKNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGQILV
DGVNVQDYNLEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSKETPLSETAMWQALELAQSKAFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=516674 I6I32_RS06660 WP_198464351.1 1364096..1365865(+) (rcrP) [Streptococcus oralis strain FDAARGOS_1075]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGAATGATTGTCCTTACGATTCTGTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAGGTGCCGACTTATATTTCGCAAATTACAGAATTACTGGGAACGTCTGGAACGCAGTTGGGTGAAC
TCTGGTCACCAGCTGCGAAGATGATTGGTTTGTCTTTATTGGCTTTCTTTTCATCTGTTATGGTTGGTTTCTTTGCCGCT
CGTGTTGCAGCATCCTATACAACCCATCTACGTAGAGATGTATTTCATCGTGTTTTAGATTTTTCGCAGACAGAAATCAA
ACGCTTTTCAATCCCAAGTCTCTTGACTCGGACGACCAATGATATTACCCAGGTACAGATGCTCTTTACAATGGGCTTGC
AAGTGGTTACTCGTGGGCCAATTATGGCTATCTGGGCCATTGGAAAAATCCTTGGAAAATCGGAATACTGGCTCTGGGCG
GTCCTTGTGGCTGTTATTGTCAATGTCTTGATGACCACCGTTCTCATGACTCTGGCCTTTCCAAAACAATCTGTTATCCA
AAAATTGACAGATAAACTCAATAGCATCACTCGTGAAAGCTTGACTGGGATTCGAGTTGTTCGCGCATACAATGCCGAGG
ATTACCAAGATAAGAAATTTGAAGCAGCCAACGATGAGGTAACACGTCTCAATCTCTTTGTCAATCGATTGATGGCCATT
ATAAACCCCATTATGATGGCGATTTCCAGTGGATTAAGTTTAGCCATTTACTGGATTGGTGCCTATATTATCAACGATGC
AAGTTTGACAGAACGTCTACCACTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTCGTGATGGGCTTCC
TTCTCATGGGAGCGCTCTTTATCGTTCTTCCTCGTACCTTGGTTTCGGCAGGACGTATCAATCAAGTATTGGATTTGCAT
TCTTCTATTGAAAATCCTAGTCATGCACAGACAGCGGATCCTTCAGTTCAAGGACAAGTGGAATTCCGTGATGTAACTTT
CCGCTACTCTAAAAACTCAGAAGCAGTCGTGGAACATGTCACTTTCAAAGCAGAAGCGGGTCAAACCGTAGCCTTCATCG
GATCGACTGGATCAGGTAAGTCCACGCTAGTCAACCTATTGCCTCGTTTTTACGACGTTTCAGATGGACAAATCCTAGTG
GATGGTGTCAATGTACAAGATTACAATTTGGAAGATTTGCGCAATAAGGTCGGCTATATTCCACAAAAAGCTGTACTTTT
TTCTGGAGATGTCAAGGGGAACTTGGACTTTGGTAAGAGCAAAGAAACTCCTCTAAGCGAGACTGCTATGTGGCAAGCTC
TTGAATTGGCCCAGTCTAAAGCATTTATCGAGGACAAGGAAGCGGGTCTTGCATCAGAAGTAGCCCAAGGTGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAACCAGAGATTCTCATCTTTGATGACTC
TTTCTCAGCCTTGGACTACAAGACAGATCGTGTCCTTCGCCAAGAGCTAGCTGAGAAAACAAAATCCATGACCAAGCTCA
TCGTAGCGCAACGGATTTCTACCATTATGGACGCCGACCTGATCTTAGTTTTGGATCAAGGTAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTTGCAACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

64.892

100

0.662