Detailed information NTG0516666

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: I6I32_RS05670
• Genome accession: NZ_CP066041
• Coordinates: 1158832..1161264 (+)
• Length: 810 a.a.
• NCBI ID: WP_198464256.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain FDAARGOS_1075
• Function: degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1153832..1166264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I32_RS05660 (I6I32_05660)	-	1154397..1158200 (+)	3804	WP_269780271.1	Spy0128 family protein	-
I6I32_RS05665 (I6I32_05665)	-	1158372..1158830 (+)	459	WP_001211263.1	CtsR family transcriptional regulator	-
I6I32_RS05670 (I6I32_05670)	clpC	1158832..1161264 (+)	2433	WP_198464256.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
I6I32_RS05675 (I6I32_05675)	-	1161410..1162468 (+)	1059	WP_198464257.1	AAA family ATPase	-
I6I32_RS05680 (I6I32_05680)	pnuC	1162478..1163257 (+)	780	WP_049479311.1	nicotinamide riboside transporter PnuC	-
I6I32_RS05685 (I6I32_05685)	-	1163259..1164032 (+)	774	WP_198464258.1	NUDIX domain-containing protein	-
I6I32_RS05690 (I6I32_05690)	-	1164081..1164311 (-)	231	WP_061428118.1	hypothetical protein	-
I6I32_RS05695 (I6I32_05695)	-	1164576..1165259 (+)	684	WP_198464259.1	hypothetical protein	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 90403.31 Da
• Isoelectric Point: 6.3045

>NTDB_id=516666 I6I32_RS05670 WP_198464256.1 1158832..1161264(+) (clpC) [Streptococcus oralis strain FDAARGOS_1075]
MNYSKALNECIESAYMVASHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLEVLFAEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDQKDQVRIAALRRNLEGRAGWTREDLKA
LRQRHRTVTDKQNSMANMMGMPQAQSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPAEMVKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGKVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSLADSMTILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKSKHVKTDESDLTPADKALMDGKWKQAAQLIAKEQEVPVYKELVTESEI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRIFEELKKTYRPEFINRIDEKVVFHSLDS
KHMQEIVKIMVKPLIASLAEKGIDLKLQASALKLLASHGYNPEMGARPLRRTLQTEVEDKLAEFLLKGELVAGKTLKIGV
KAGQLKFDIA

Nucleotide

• Length: 2433 bp

>NTDB_id=516666 I6I32_RS05670 WP_198464256.1 1158832..1161264(+) (clpC) [Streptococcus oralis strain FDAARGOS_1075]
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAGAGTGCCTACATGGTTGCGAGCCATTTTGGAGCCCGTTATCTAGA
GTCATGGCATTTGTTGATTGCCATGTCCAATCACAGTTACAGTGTAGCAGGTGCGACTCTAAATGATTATCCTTATGAAA
TGGATCGTTTAGAAGAGGTTGCTTTGGAACTGACTGAAACGGACTATAGCCAAGATGAAACCTTTACGGAATTACCTTTT
TCCCATCGTTTGGAGGTTCTCTTTGCAGAAGCAGAGTATGTAGCCTCAGTGGTCCATGCAAAGGTGCTAGGGACAGAGCA
TGTTCTCTATGCGATCTTGCATGATGGTAATGCCTTGGCAACTCGCATCTTGGAGAGAGCAGGCTTTTCTTATGAAGACC
AGAAAGATCAGGTCAGAATTGCTGCTCTTCGTCGCAATCTAGAAGGGCGTGCAGGATGGACAAGAGAAGATCTCAAGGCT
TTGCGTCAACGTCATCGCACAGTAACTGACAAGCAAAATTCCATGGCCAATATGATGGGCATGCCTCAAGCTCAAAGTGG
TGGTCTAGAGGACTACACGCATGACCTGACGGAGCAAGCGCGTTCTGGCAAGTTAGAGCCAGTTATCGGTCGAGACAAGG
AAATCTCACGTATGATTCAGATTTTGAGTCGGAAGACCAAGAACAATCCTGTCTTGGTTGGAGATGCGGGTGTCGGGAAA
ACAGCTTTAGCACTTGGGCTTGCCCAGCGTATTGCCAGTGGGGACGTACCAGCTGAAATGGTCAAGATGCGTGTTCTAGA
GCTTGATTTGATGAATGTCGTTGCAGGGACACGTTTCCGTGGTGACTTTGAAGAGCGTATGAACAACATCATCAAGGATA
TCGAGGAAGATGGCAAAGTGATCCTCTTTATCGATGAACTCCACACCATCATGGGTTCTGGTAGCGGTATTGACTCGACT
CTGGATGCAGCCAATATCTTGAAGCCAGCCTTAGCTCGCGGAACTCTGAGAACAGTTGGTGCAACCACTCAGGAAGAATA
CCAGAAACATATCGAAAAAGATGCAGCTCTTTCTCGTCGTTTCGCTAAAGTAACGATTGAAGAGCCAAGTCTAGCTGACA
GTATGACTATTTTGCAAGGTTTGAAAGCTACCTATGAGAAACACCATCGTGTGCAAATTACAGATGAAGCCGTTGAAACA
GCTGTTAAGATGGCGCATCGTTACTTGACCAGTCGTCACTTACCAGACTCTGCCATCGATCTCTTAGATGAAGCAGCAGC
AACAGTGCAAAACAAATCCAAGCATGTGAAAACAGACGAATCCGACTTGACTCCAGCTGACAAGGCCCTGATGGATGGCA
AGTGGAAACAAGCTGCCCAGCTAATTGCAAAGGAGCAGGAAGTCCCTGTCTATAAAGAATTGGTAACAGAATCTGAAATT
TTGACTACCTTGAGTCGCTTGTCAGGGATTCCAGTTCAAAAACTGACGCAAACAGATGCTAAGAAATACCTGAACTTGGA
AGCTGAATTACACAAACGTGTCATCGGTCAAGATCAAGCAGTTTCAAGTATTAGCCGTGCGATTCGTCGCAATCAGTCAG
GTATTCGCAGTCACAAGCGTCCAATTGGTTCCTTTATGTTCCTAGGGCCGACAGGAGTCGGTAAGACCGAATTGGCAAAG
GCTCTGGCAGAAGTTCTCTTTGATGACGAATCAGCCCTTATCCGCTTTGATATGAGTGAGTATATGGAGAAATTTGCGGC
TAGCCGTCTCAATGGAGCTCCTCCGGGTTATGTGGGCTACGAAGAAGGTGGGGAGTTAACCGAGAAGGTTCGCAACAAAC
CATACTCTGTACTCCTCTTTGACGAGGTAGAGAAGGCCCACCCAGATATCTTTAATGTTCTCTTGCAGGTTCTGGACGAC
GGTGTCTTGACAGATAGCAAGGGACGCAAGGTGGACTTTTCAAATACCATTATCATCATGACGTCAAACCTTGGTGCGAC
GGCCCTTCGTGATGACAAGACGGTTGGCTTTGGAGCCAAAGACATTCGTTTTGATCAGGAAAATATGGAAAAACGAATCT
TCGAAGAGTTGAAAAAAACTTATCGACCAGAGTTTATCAACCGTATTGATGAAAAGGTGGTCTTCCATAGCTTAGATAGC
AAACACATGCAAGAAATCGTTAAGATCATGGTGAAACCATTGATTGCTAGCCTGGCAGAGAAGGGCATCGACTTGAAACT
GCAAGCTTCGGCACTGAAGTTGCTAGCTAGTCACGGTTACAATCCAGAAATGGGAGCTCGTCCACTTCGCAGAACCCTGC
AAACAGAAGTGGAAGACAAGTTGGCAGAATTTCTTCTCAAGGGAGAATTGGTGGCAGGTAAGACACTTAAGATTGGTGTC
AAAGCAGGCCAGTTAAAATTTGATATTGCTTAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (540-711)

• ATPase family associated with various cellular activities (AAA) (AAA) (231-362)

• AAA lid domain (AAA_lid_9) (371-447)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (103-133)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (14-49)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (718-797)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus pneumoniae Rx1	95.802	100	0.958
clpC	Streptococcus pneumoniae D39	95.802	100	0.958
clpC	Streptococcus pneumoniae TIGR4	95.802	100	0.958
clpC	Streptococcus mutans UA159	67.282	100	0.675
clpC	Streptococcus thermophilus LMD-9	66.83	100	0.672
clpC	Streptococcus thermophilus LMG 18311	66.708	100	0.67
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	49.396	100	0.505
clpC	Bacillus subtilis subsp. subtilis str. 168	45.197	100	0.453
clpE	Streptococcus mutans UA159	48.871	76.543	0.374
clpC	Lactococcus lactis subsp. cremoris KW2	46.571	77.407	0.36