Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   I6I32_RS03140 Genome accession   NZ_CP066041
Coordinates   639047..639340 (-) Length   97 a.a.
NCBI ID   WP_049504738.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 634047..644340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS03130 (I6I32_03130) metF 635508..636374 (-) 867 WP_198465063.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  I6I32_RS03135 (I6I32_03135) metE 636445..638694 (-) 2250 WP_198464907.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  I6I32_RS03140 (I6I32_03140) HI0659 639047..639340 (-) 294 WP_049504738.1 helix-turn-helix domain-containing protein Machinery gene
  I6I32_RS03145 (I6I32_03145) - 639330..639695 (-) 366 WP_198465064.1 type II toxin-antitoxin system RelE/ParE family toxin -
  I6I32_RS03150 (I6I32_03150) - 639852..640217 (-) 366 WP_198464908.1 TIGR02328 family protein -
  I6I32_RS03155 (I6I32_03155) - 640201..640605 (-) 405 WP_042903099.1 YbgA family protein -
  I6I32_RS03160 (I6I32_03160) - 640659..642404 (-) 1746 WP_042902789.1 DUF2075 domain-containing protein -
  I6I32_RS03165 (I6I32_03165) - 642404..642739 (-) 336 WP_042902790.1 nucleotide pyrophosphohydrolase -
  I6I32_RS03170 (I6I32_03170) - 642862..643713 (-) 852 WP_042902791.1 hypothetical protein -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10722.39 Da        Isoelectric Point: 5.1991

>NTDB_id=516629 I6I32_RS03140 WP_049504738.1 639047..639340(-) (HI0659) [Streptococcus oralis strain FDAARGOS_1075]
MKNSAIGSNWKDIRSELFTKEEILESDMRVAIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKG

Nucleotide


Download         Length: 294 bp        

>NTDB_id=516629 I6I32_RS03140 WP_049504738.1 639047..639340(-) (HI0659) [Streptococcus oralis strain FDAARGOS_1075]
ATGAAGAATAGTGCCATTGGAAGTAATTGGAAGGATATCCGATCTGAACTCTTTACCAAGGAGGAAATCCTTGAAAGTGA
TATGCGAGTGGCTATCATGAGTGAGTTGATTGAGGCTAGACATGAGCAAGGTATCAGTCAGAAAAAGCTAGAGGAACTCA
GTGGAGTAAGCCAGCCTGTTATAGCTAGGATGGAGACAGGAAAGACCAGTCCTCAGTTGGATACGGTCTTAAAAGTTTTA
GCAAGTTTAGGAAAGACACTAGCAGTCGTTCCACTTGAACAGGAAAAAGGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557