Detailed information NTG0516575

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KZO13_RS21840
• Genome accession: NZ_CP080056
• Coordinates: 4590986..4592011 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 18SZHZ655Rt
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4585986..4597011

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZO13_RS21815 (KZO13_21810)	metJ	4586547..4586864 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KZO13_RS21820 (KZO13_21815)	yiiX	4586924..4587532 (+)	609	WP_001402675.1	YiiX family permuted papain-like enzyme	-
KZO13_RS21825 (KZO13_21820)	-	4587539..4588162 (+)	624	WP_001402674.1	TIGR02117 family protein	-
KZO13_RS21830 (KZO13_21825)	rpmE	4588217..4588429 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KZO13_RS21835 (KZO13_21830)	priA	4588632..4590830 (+)	2199	WP_001395720.1	primosomal protein N'	Machinery gene
KZO13_RS21840 (KZO13_21835)	cytR	4590986..4592011 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KZO13_RS21845 (KZO13_21840)	ftsN	4592103..4593062 (+)	960	WP_000068834.1	cell division protein FtsN	-
KZO13_RS21850 (KZO13_21845)	hslV	4593155..4593685 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KZO13_RS21855 (KZO13_21850)	hslU	4593695..4595026 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
KZO13_RS21860 (KZO13_21855)	menA	4595093..4596019 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KZO13_RS21865 (KZO13_21860)	rraA	4596112..4596597 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KZO13_RS21870 (KZO13_21865)	zapB	4596682..4596927 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=516575 KZO13_RS21840 WP_000644904.1 4590986..4592011(+) (cytR) [Escherichia coli strain 18SZHZ655Rt]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=516575 KZO13_RS21840 WP_000644904.1 4590986..4592011(+) (cytR) [Escherichia coli strain 18SZHZ655Rt]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628