Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | I6H85_RS03600 | Genome accession | NZ_CP066027 |
| Coordinates | 696656..696961 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain FDAARGOS_1028 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 691656..701961
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6H85_RS03565 (I6H85_03565) | - | 692071..692832 (+) | 762 | WP_025431509.1 | ATP-binding protein | - |
| I6H85_RS03570 (I6H85_03570) | - | 692829..693512 (+) | 684 | WP_002777124.1 | 3-methyladenine DNA glycosylase | - |
| I6H85_RS03575 (I6H85_03575) | thiD | 693512..694324 (+) | 813 | WP_002777122.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| I6H85_RS03580 (I6H85_03580) | thiE | 694314..694946 (+) | 633 | WP_002777120.1 | thiamine phosphate synthase | - |
| I6H85_RS03585 (I6H85_03585) | - | 694924..695553 (+) | 630 | WP_002777119.1 | uroporphyrinogen-III synthase | - |
| I6H85_RS03590 (I6H85_03590) | - | 695546..695998 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| I6H85_RS03595 (I6H85_03595) | - | 695995..696663 (-) | 669 | WP_002777103.1 | hypothetical protein | - |
| I6H85_RS03600 (I6H85_03600) | ctsT | 696656..696961 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| I6H85_RS03605 (I6H85_03605) | proC | 696958..697695 (-) | 738 | WP_002787902.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| I6H85_RS03610 (I6H85_03610) | fliW | 697695..698084 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| I6H85_RS03615 (I6H85_03615) | - | 698248..698895 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| I6H85_RS03620 (I6H85_03620) | lon | 698911..701286 (+) | 2376 | WP_002777089.1 | endopeptidase La | - |
| I6H85_RS03625 (I6H85_03625) | rpsR | 701342..701602 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=516572 I6H85_RS03600 WP_002777852.1 696656..696961(-) (ctsT) [Campylobacter coli strain FDAARGOS_1028]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=516572 I6H85_RS03600 WP_002777852.1 696656..696961(-) (ctsT) [Campylobacter coli strain FDAARGOS_1028]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |