Detailed information NTG0516328

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: I6I25_RS05085
• Genome accession: NZ_CP066013
• Coordinates: 971302..972276 (+)
• Length: 324 a.a.
• NCBI ID: WP_021339253.1
• Uniprot ID: -
• Organism: Staphylococcus equorum strain FDAARGOS_1068
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 966302..977276

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I25_RS05055 (I6I25_05070)	-	966483..967022 (+)	540	WP_021339257.1	5-formyltetrahydrofolate cyclo-ligase	-
I6I25_RS05060 (I6I25_05075)	-	967037..968494 (+)	1458	WP_198456457.1	rhomboid family intramembrane serine protease	-
I6I25_RS05065 (I6I25_05080)	-	968478..968678 (+)	201	WP_002512453.1	YqgQ family protein	-
I6I25_RS05070 (I6I25_05085)	-	969268..970254 (+)	987	WP_021339255.1	glucokinase	-
I6I25_RS05075 (I6I25_05090)	-	970254..970577 (+)	324	WP_021339254.1	MTH1187 family thiamine-binding protein	-
I6I25_RS05080 (I6I25_05095)	-	970579..971202 (+)	624	WP_002507502.1	MBL fold metallo-hydrolase	-
I6I25_RS05085 (I6I25_05100)	comGA	971302..972276 (+)	975	WP_021339253.1	competence type IV pilus ATPase ComGA	Machinery gene
I6I25_RS05090 (I6I25_05105)	comGB	972248..973315 (+)	1068	WP_021339252.1	competence type IV pilus assembly protein ComGB	-
I6I25_RS05095 (I6I25_05110)	comGC	973340..973657 (+)	318	WP_031265988.1	competence type IV pilus major pilin ComGC	Machinery gene
I6I25_RS13430 (I6I25_05115)	-	973686..974081 (+)	396	WP_256092535.1	competence protein	-
I6I25_RS05100 (I6I25_05120)	comGF	974068..974781 (+)	714	WP_021339249.1	competence type IV pilus minor pilin ComGF	-
I6I25_RS05105 (I6I25_05125)	-	974988..975461 (+)	474	WP_236593604.1	shikimate kinase	-
I6I25_RS05110 (I6I25_05130)	gcvT	975640..976731 (+)	1092	WP_021339246.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37344.44 Da
• Isoelectric Point: 9.0566

>NTDB_id=516328 I6I25_RS05085 WP_021339253.1 971302..972276(+) (comGA) [Staphylococcus equorum strain FDAARGOS_1068]
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIRTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEINQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI

Nucleotide

• Length: 975 bp

>NTDB_id=516328 I6I25_RS05085 WP_021339253.1 971302..972276(+) (comGA) [Staphylococcus equorum strain FDAARGOS_1068]
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCGGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGCGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTATTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	61.111	100	0.611
comGA	Staphylococcus aureus N315	61.111	100	0.611