Detailed information NTG0516292

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KYK84_RS21615
• Genome accession: NZ_CP079993
• Coordinates: 4479242..4480267 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EV36
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4474242..4485267

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KYK84_RS21595 (KYK84_21535)	metJ	4475427..4475744 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KYK84_RS21600 (KYK84_21540)	yiiX	4475804..4476412 (+)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
KYK84_RS21605 (KYK84_21545)	rpmE	4476473..4476685 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KYK84_RS21610 (KYK84_21550)	priA	4476888..4479086 (+)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
KYK84_RS21615 (KYK84_21555)	cytR	4479242..4480267 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KYK84_RS21620 (KYK84_21560)	ftsN	4480359..4481318 (+)	960	WP_000068834.1	cell division protein FtsN	-
KYK84_RS21625 (KYK84_21565)	hslV	4481411..4481941 (+)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
KYK84_RS21630 (KYK84_21570)	hslU	4481951..4483282 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KYK84_RS21635 (KYK84_21575)	menA	4483349..4484275 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KYK84_RS21640 (KYK84_21580)	rraA	4484368..4484853 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KYK84_RS21645 (KYK84_21585)	zapB	4484938..4485183 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=516292 KYK84_RS21615 WP_000644904.1 4479242..4480267(+) (cytR) [Escherichia coli strain EV36]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=516292 KYK84_RS21615 WP_000644904.1 4479242..4480267(+) (cytR) [Escherichia coli strain EV36]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628