Detailed information NTG0516267

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6H54_RS03365
• Genome accession: NZ_CP066006
• Coordinates: 760622..761842 (-)
• Length: 406 a.a.
• NCBI ID: WP_034390747.1
• Uniprot ID: -
• Organism: Delftia acidovorans strain FDAARGOS_997
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 755622..766842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H54_RS03340 (I6H54_03340)	-	756541..757086 (+)	546	WP_016454136.1	MarR family winged helix-turn-helix transcriptional regulator	-
I6H54_RS03345 (I6H54_03345)	-	757154..757912 (+)	759	WP_034390739.1	class II aldolase/adducin family protein	-
I6H54_RS03350 (I6H54_03350)	-	757931..758956 (+)	1026	WP_034390741.1	2-dehydropantoate 2-reductase	-
I6H54_RS03355 (I6H54_03355)	cutA	759009..759407 (+)	399	WP_034390743.1	divalent-cation tolerance protein CutA	-
I6H54_RS03360 (I6H54_03360)	-	759394..760383 (-)	990	WP_034390745.1	Bug family tripartite tricarboxylate transporter substrate binding protein	-
I6H54_RS03365 (I6H54_03365)	pilA	760622..761842 (-)	1221	WP_034390747.1	signal recognition particle-docking protein FtsY	Machinery gene
I6H54_RS03370 (I6H54_03370)	-	761871..763349 (+)	1479	WP_013803936.1	M16 family metallopeptidase	-
I6H54_RS03375 (I6H54_03375)	-	763376..764737 (+)	1362	WP_034390750.1	M16 family metallopeptidase	-
I6H54_RS03380 (I6H54_03380)	rsmD	764734..765444 (+)	711	WP_012203729.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6H54_RS03385 (I6H54_03385)	coaD	765577..766077 (+)	501	WP_034398214.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42486.40 Da
• Isoelectric Point: 5.7832

>NTDB_id=516267 I6H54_RS03365 WP_034390747.1 760622..761842(-) (pilA) [Delftia acidovorans strain FDAARGOS_997]
MFSFFKKKPTPSAAEISPTDSSAAPEKAGIPATPPQDSPPALPPAAPAAPAADTGSAWWRKPFGGSKGDAAPPETPPAPA
AAPASTIAPADFIAAPEPTAKPEAEGASRQNWMQRLKTGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLADLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLVIGEHQPTVIMVAGVNGAGKTTSIGKLTRHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVSKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=516267 I6H54_RS03365 WP_034390747.1 760622..761842(-) (pilA) [Delftia acidovorans strain FDAARGOS_997]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCGCCGCCGAGATTTCCCCGACGGACAGCAGCGCCGCGCCTGAAAA
GGCCGGCATTCCCGCAACCCCACCGCAGGACAGCCCCCCTGCCCTGCCACCGGCCGCACCAGCAGCCCCGGCCGCCGACA
CCGGCAGTGCTTGGTGGCGCAAGCCCTTTGGCGGCAGCAAGGGCGATGCCGCGCCGCCCGAGACCCCGCCTGCCCCAGCT
GCAGCACCCGCGTCCACCATCGCGCCTGCGGACTTCATTGCCGCGCCCGAGCCCACGGCCAAGCCCGAGGCCGAAGGTGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGACCGGCCTGCGCAAGACCGGCAGCAGCATTGCCACGGTCTTCACGGGCA
CGCAGATCAACGATGCGCTGTACGAGGAATTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCGCCGACCTGCGCCGCCGCGTCAAGGAGGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGCTGCTGGCAGATGC
CCTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGGTCATCGGTGAGCACCAGCCCACCGTGATCATGGTGGCTGGCG
TCAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTGACCCGTCACCTGGCCGATGAAGGCCAGAGCGTGCTGCTGGCC
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTTGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGGGGCGATCCTGCGGCGGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCGCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCAGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCAGCAAGGCCGAC
GCCACGGCGCCCCATGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTCGA
CGATGCGCTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAAGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAGGACCTGGAAACCTTCAACGCCCGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.052	100	0.51